STRINGSTRING
F6YCG7_CIOIN F6YCG7_CIOIN LOC100180959 LOC100180959 F6W8X6_CIOIN F6W8X6_CIOIN LOC100184311 LOC100184311 LOC100176626 LOC100176626 F7AMF6_CIOIN F7AMF6_CIOIN LOC100175227 LOC100175227 LOC100182407 LOC100182407 Vachtp Vachtp LOC100181148 LOC100181148 F6XHQ2_CIOIN F6XHQ2_CIOIN LOC100176424 LOC100176424 F6SPL0_CIOIN F6SPL0_CIOIN F7A6N9_CIOIN F7A6N9_CIOIN F6RXW9_CIOIN F6RXW9_CIOIN LOC100182553 LOC100182553 LOC100185940 LOC100185940 F6RHH3_CIOIN F6RHH3_CIOIN LOC100176818 LOC100176818 LOC100178403 LOC100178403 LOC100178823 LOC100178823 F6UP73_CIOIN F6UP73_CIOIN LOC100185622 LOC100185622 LOC100184004 LOC100184004 LOC100175404 LOC100175404 F6UMA7_CIOIN F6UMA7_CIOIN F6YIU2_CIOIN F6YIU2_CIOIN LOC101242403 LOC101242403 LOC100176522 LOC100176522 LOC100181007 LOC100181007 erd2 erd2 LOC100176668 LOC100176668 LOC100181913 LOC100181913 LOC100181883 LOC100181883 LOC100175551 LOC100175551 LOC100185196 LOC100185196 LOC100185647 LOC100185647 LOC100184992 LOC100184992 F7ABF6_CIOIN F7ABF6_CIOIN F6Z0L2_CIOIN F6Z0L2_CIOIN F6ZH66_CIOIN F6ZH66_CIOIN F6RPM3_CIOIN F6RPM3_CIOIN F6QV69_CIOIN F6QV69_CIOIN F6UMD7_CIOIN F6UMD7_CIOIN F6VN74_CIOIN F6VN74_CIOIN F6WA29_CIOIN F6WA29_CIOIN F6W9R3_CIOIN F6W9R3_CIOIN F6SJR0_CIOIN F6SJR0_CIOIN F6Z6E4_CIOIN F6Z6E4_CIOIN LOC100183335 LOC100183335 H2XLC2_CIOIN H2XLC2_CIOIN LOC100187027 LOC100187027 H2XRE1_CIOIN H2XRE1_CIOIN LOC100178401 LOC100178401 H2XU17_CIOIN H2XU17_CIOIN H2XU55_CIOIN H2XU55_CIOIN H2XWN2_CIOIN H2XWN2_CIOIN Srebp Srebp H2XZK4_CIOIN H2XZK4_CIOIN H2Y0X3_CIOIN H2Y0X3_CIOIN zf(u1like)-1 zf(u1like)-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6YCG7_CIOINAdenylate cyclase type 6; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1086 aa)
LOC100180959Receptor expression-enhancing protein. (201 aa)
F6W8X6_CIOINUncharacterized protein. (248 aa)
LOC100184311Peflin-like. (184 aa)
LOC100176626Sorcin-like. (181 aa)
F7AMF6_CIOINClathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family. (1635 aa)
LOC100175227Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (965 aa)
LOC100182407Protein SEC13 homolog; Belongs to the WD repeat SEC13 family. (312 aa)
VachtpMFS domain-containing protein. (657 aa)
LOC100181148Syntaxin-17-like. (363 aa)
F6XHQ2_CIOINUncharacterized protein. (914 aa)
LOC100176424V-type proton ATPase subunit D-like. (255 aa)
F6SPL0_CIOINUncharacterized protein. (503 aa)
F7A6N9_CIOINUncharacterized protein. (480 aa)
F6RXW9_CIOINV-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (158 aa)
LOC100182553AP-2 complex subunit mu isoform X3; Belongs to the adaptor complexes medium subunit family. (434 aa)
LOC100185940Coatomer subunit epsilon; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Belongs to the COPE family. (297 aa)
F6RHH3_CIOINUncharacterized protein. (967 aa)
LOC100176818GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family. (192 aa)
LOC100178403Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (932 aa)
LOC100178823V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. (474 aa)
F6UP73_CIOINENTH domain-containing protein. (222 aa)
LOC100185622Programmed cell death protein 6-like. (208 aa)
LOC100184004Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (225 aa)
LOC100175404Adaptin_N domain-containing protein. (590 aa)
F6UMA7_CIOINPID domain-containing protein. (458 aa)
F6YIU2_CIOINWD_REPEATS_REGION domain-containing protein. (1205 aa)
LOC101242403Uncharacterized protein LOC101242403 isoform X1. (410 aa)
LOC100176522AP-1 complex subunit gamma. (888 aa)
LOC100181007Uncharacterized protein. (945 aa)
erd2ER lumen protein-retaining receptor. (212 aa)
LOC100176668Transmembrane emp24 domain-containing protein 2. (203 aa)
LOC100181913V-type proton ATPase 21 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family. (205 aa)
LOC100181883AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1057 aa)
LOC100175551Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (510 aa)
LOC100185196Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. (1225 aa)
LOC100185647Uncharacterized protein. (525 aa)
LOC100184992Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (214 aa)
F7ABF6_CIOINAP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. (954 aa)
F6Z0L2_CIOINClathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (235 aa)
F6ZH66_CIOINENTH domain-containing protein. (243 aa)
F6RPM3_CIOINClathrin_bdg domain-containing protein. (357 aa)
F6QV69_CIOINTSNAXIP1_N domain-containing protein. (350 aa)
F6UMD7_CIOINUncharacterized protein. (677 aa)
F6VN74_CIOINCoatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (177 aa)
F6WA29_CIOINUso1_p115_C domain-containing protein. (118 aa)
F6W9R3_CIOINUncharacterized protein. (181 aa)
F6SJR0_CIOINUncharacterized protein. (187 aa)
F6Z6E4_CIOINV-SNARE domain-containing protein. (176 aa)
LOC100183335Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (772 aa)
H2XLC2_CIOINAP complex subunit beta. (772 aa)
LOC100187027AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (142 aa)
H2XRE1_CIOINDUF1681 domain-containing protein. (215 aa)
LOC100178401Uncharacterized protein. (250 aa)
H2XU17_CIOINLongin domain-containing protein. (62 aa)
H2XU55_CIOINVWFA domain-containing protein. (510 aa)
H2XWN2_CIOINER lumen protein-retaining receptor. (206 aa)
SrebpUncharacterized protein. (257 aa)
H2XZK4_CIOINB2-adapt-app_C domain-containing protein. (146 aa)
H2Y0X3_CIOINMFS domain-containing protein. (144 aa)
zf(u1like)-1Zn-finger (U1-like)-1 isoform X1. (198 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.