(18 nodes) Regulation of peptidyl-serine phosphorylation network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6WEC9_CIOIN	Uncharacterized protein. (1002 aa)
	LOC100176030	WD_REPEATS_REGION domain-containing protein. (1206 aa)
	LOC100177697	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (236 aa)
	F7BBJ6_CIOIN	WD_REPEATS_REGION domain-containing protein. (473 aa)
	sfrp2	Secreted frizzled-related protein isoform X1. (293 aa)
	F6SDP7_CIOIN	EGF-like domain-containing protein. (628 aa)
	LOC100179624	Histone-lysine N-methyltransferase SMYD3. (430 aa)
	F6Z8I7_CIOIN	Uncharacterized protein. (428 aa)
	F6Y978_CIOIN	UDENN FNIP1/2-type domain-containing protein. (982 aa)
	F6YQI1_CIOIN	Uncharacterized protein. (245 aa)
	F7AAV2_CIOIN	EGF-like domain-containing protein. (618 aa)
	F6V7C2_CIOIN	Protein kinase domain-containing protein. (521 aa)
	F6YVN3_CIOIN	Uncharacterized protein. (165 aa)
	F7A3S4_CIOIN	Uncharacterized protein. (272 aa)
	H2XMJ7_CIOIN	IPPc domain-containing protein. (430 aa)
	LOC100178517	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (142 aa)
	LOC100182146	Uncharacterized protein. (656 aa)
	H2XXZ3_CIOIN	Uncharacterized protein. (870 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SDP7_CIOIN	F7AAV2_CIOIN	ENSCINP00000012732	ENSCINP00000023392	EGF-like domain-containing protein.	EGF-like domain-containing protein.	0.902
F6V7C2_CIOIN	H2XXZ3_CIOIN	ENSCINP00000024025	ENSCINP00000034527	Protein kinase domain-containing protein.	Uncharacterized protein.	0.457
F6WEC9_CIOIN	LOC100176030	ENSCINP00000000607	ENSCINP00000001261	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.858
F7AAV2_CIOIN	F6SDP7_CIOIN	ENSCINP00000023392	ENSCINP00000012732	EGF-like domain-containing protein.	EGF-like domain-containing protein.	0.902
H2XXZ3_CIOIN	F6V7C2_CIOIN	ENSCINP00000034527	ENSCINP00000024025	Uncharacterized protein.	Protein kinase domain-containing protein.	0.457
LOC100176030	F6WEC9_CIOIN	ENSCINP00000001261	ENSCINP00000000607	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.858