(11 nodes) Histone H2A ubiquitination network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	zf(ring)-23	RING-type domain-containing protein. (319 aa)
	F6ZZ26_CIOIN	RING-type domain-containing protein. (269 aa)
	F6SQE1_CIOIN	Uncharacterized protein. (651 aa)
	F6SQA2_CIOIN	DTC domain-containing protein. (81 aa)
	F6SQ79_CIOIN	RING-type domain-containing protein. (190 aa)
	F6RG85_CIOIN	RING-type domain-containing protein. (248 aa)
	F7ANR5_CIOIN	CPSF_A domain-containing protein. (1145 aa)
	F6ZAH0_CIOIN	Uncharacterized protein. (382 aa)
	H2XLG0_CIOIN	RING-type domain-containing protein. (354 aa)
	H2XLZ0_CIOIN	RING-type domain-containing protein. (223 aa)
	LOC100175224	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (156 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RG85_CIOIN	F6ZZ26_CIOIN	ENSCINP00000009676	ENSCINP00000005674	RING-type domain-containing protein.	RING-type domain-containing protein.	0.594
F6RG85_CIOIN	H2XLG0_CIOIN	ENSCINP00000009676	ENSCINP00000030492	RING-type domain-containing protein.	RING-type domain-containing protein.	0.662
F6RG85_CIOIN	H2XLZ0_CIOIN	ENSCINP00000009676	ENSCINP00000030672	RING-type domain-containing protein.	RING-type domain-containing protein.	0.672
F6ZZ26_CIOIN	F6RG85_CIOIN	ENSCINP00000005674	ENSCINP00000009676	RING-type domain-containing protein.	RING-type domain-containing protein.	0.594
F6ZZ26_CIOIN	H2XLG0_CIOIN	ENSCINP00000005674	ENSCINP00000030492	RING-type domain-containing protein.	RING-type domain-containing protein.	0.681
F6ZZ26_CIOIN	H2XLZ0_CIOIN	ENSCINP00000005674	ENSCINP00000030672	RING-type domain-containing protein.	RING-type domain-containing protein.	0.689
F7ANR5_CIOIN	LOC100175224	ENSCINP00000015292	ENSCINP00000032379	CPSF_A domain-containing protein.	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.	0.702
H2XLG0_CIOIN	F6RG85_CIOIN	ENSCINP00000030492	ENSCINP00000009676	RING-type domain-containing protein.	RING-type domain-containing protein.	0.662
H2XLG0_CIOIN	F6ZZ26_CIOIN	ENSCINP00000030492	ENSCINP00000005674	RING-type domain-containing protein.	RING-type domain-containing protein.	0.681
H2XLG0_CIOIN	H2XLZ0_CIOIN	ENSCINP00000030492	ENSCINP00000030672	RING-type domain-containing protein.	RING-type domain-containing protein.	0.799
H2XLZ0_CIOIN	F6RG85_CIOIN	ENSCINP00000030672	ENSCINP00000009676	RING-type domain-containing protein.	RING-type domain-containing protein.	0.672
H2XLZ0_CIOIN	F6ZZ26_CIOIN	ENSCINP00000030672	ENSCINP00000005674	RING-type domain-containing protein.	RING-type domain-containing protein.	0.689
H2XLZ0_CIOIN	H2XLG0_CIOIN	ENSCINP00000030672	ENSCINP00000030492	RING-type domain-containing protein.	RING-type domain-containing protein.	0.799
LOC100175224	F7ANR5_CIOIN	ENSCINP00000032379	ENSCINP00000015292	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.	CPSF_A domain-containing protein.	0.702
LOC100175224	zf(ring)-23	ENSCINP00000032379	ENSCINP00000029036	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.403
zf(ring)-23	LOC100175224	ENSCINP00000029036	ENSCINP00000032379	RING-type domain-containing protein.	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.	0.403