(9 nodes) Histone H2B ubiquitination network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6SQE1_CIOIN	Uncharacterized protein. (651 aa)
	F6SQA2_CIOIN	DTC domain-containing protein. (81 aa)
	F6SQ79_CIOIN	RING-type domain-containing protein. (190 aa)
	LOC494392	Uncharacterized protein LOC494392. (131 aa)
	LOC100175816	TPR_REGION domain-containing protein. (1034 aa)
	F6TZN8_CIOIN	WW domain-containing protein. (437 aa)
	H2XM66_CIOIN	E3 ubiquitin protein ligase. (985 aa)
	H2XUU5_CIOIN	Uncharacterized protein. (532 aa)
	LOC104265921	E3 ubiquitin protein ligase. (208 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6TZN8_CIOIN	H2XM66_CIOIN	ENSCINP00000025963	ENSCINP00000030748	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.688
F6TZN8_CIOIN	H2XUU5_CIOIN	ENSCINP00000025963	ENSCINP00000033429	WW domain-containing protein.	Uncharacterized protein.	0.594
F6TZN8_CIOIN	LOC100175816	ENSCINP00000025963	ENSCINP00000018251	WW domain-containing protein.	TPR_REGION domain-containing protein.	0.499
F6TZN8_CIOIN	LOC104265921	ENSCINP00000025963	ENSCINP00000035714	WW domain-containing protein.	E3 ubiquitin protein ligase.	0.655
F6TZN8_CIOIN	LOC494392	ENSCINP00000025963	ENSCINP00000017068	WW domain-containing protein.	Uncharacterized protein LOC494392.	0.905
H2XM66_CIOIN	F6TZN8_CIOIN	ENSCINP00000030748	ENSCINP00000025963	E3 ubiquitin protein ligase.	WW domain-containing protein.	0.688
H2XM66_CIOIN	H2XUU5_CIOIN	ENSCINP00000030748	ENSCINP00000033429	E3 ubiquitin protein ligase.	Uncharacterized protein.	0.731
H2XM66_CIOIN	LOC100175816	ENSCINP00000030748	ENSCINP00000018251	E3 ubiquitin protein ligase.	TPR_REGION domain-containing protein.	0.602
H2XM66_CIOIN	LOC104265921	ENSCINP00000030748	ENSCINP00000035714	E3 ubiquitin protein ligase.	E3 ubiquitin protein ligase.	0.545
H2XM66_CIOIN	LOC494392	ENSCINP00000030748	ENSCINP00000017068	E3 ubiquitin protein ligase.	Uncharacterized protein LOC494392.	0.957
H2XUU5_CIOIN	F6TZN8_CIOIN	ENSCINP00000033429	ENSCINP00000025963	Uncharacterized protein.	WW domain-containing protein.	0.594
H2XUU5_CIOIN	H2XM66_CIOIN	ENSCINP00000033429	ENSCINP00000030748	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.731
H2XUU5_CIOIN	LOC100175816	ENSCINP00000033429	ENSCINP00000018251	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.992
H2XUU5_CIOIN	LOC104265921	ENSCINP00000033429	ENSCINP00000035714	Uncharacterized protein.	E3 ubiquitin protein ligase.	0.730
H2XUU5_CIOIN	LOC494392	ENSCINP00000033429	ENSCINP00000017068	Uncharacterized protein.	Uncharacterized protein LOC494392.	0.999
LOC100175816	F6TZN8_CIOIN	ENSCINP00000018251	ENSCINP00000025963	TPR_REGION domain-containing protein.	WW domain-containing protein.	0.499
LOC100175816	H2XM66_CIOIN	ENSCINP00000018251	ENSCINP00000030748	TPR_REGION domain-containing protein.	E3 ubiquitin protein ligase.	0.602
LOC100175816	H2XUU5_CIOIN	ENSCINP00000018251	ENSCINP00000033429	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.992
LOC100175816	LOC104265921	ENSCINP00000018251	ENSCINP00000035714	TPR_REGION domain-containing protein.	E3 ubiquitin protein ligase.	0.556
LOC100175816	LOC494392	ENSCINP00000018251	ENSCINP00000017068	TPR_REGION domain-containing protein.	Uncharacterized protein LOC494392.	0.999