(34 nodes) Cellular response to UV network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	F6WHL2_CIOIN	UmuC domain-containing protein. (288 aa)
	LOC100175879	CULLIN_2 domain-containing protein; Belongs to the cullin family. (614 aa)
	LOC100179498	DNA repair protein complementing XP-A cells homolog. (279 aa)
	F6W6K0_CIOIN	Uncharacterized protein. (534 aa)
	F6ZYB8_CIOIN	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. (599 aa)
	LOC100178968	DNA polymerase. (1064 aa)
	LOC100186563	Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. (599 aa)
	F6Z5N9_CIOIN	Rhomboid domain-containing protein. (213 aa)
	F6TV58_CIOIN	Uncharacterized protein. (147 aa)
	LOC100177411	RuvB-like helicase; Belongs to the RuvB family. (467 aa)
	F6YQR4_CIOIN	Uncharacterized protein. (754 aa)
	F6RS66_CIOIN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (462 aa)
	LOC100187100	Lysine-specific histone demethylase 1A. (705 aa)
	F7ANR5_CIOIN	CPSF_A domain-containing protein. (1145 aa)
	F6Z8G0_CIOIN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (454 aa)
	F6R7T5_CIOIN	Uncharacterized protein. (1533 aa)
	F6Q9D5_CIOIN	Metallophos domain-containing protein. (435 aa)
	Ci-ZF(PARP)-3	Zinc finger protein. (565 aa)
	LOC100179846	Lymphokine-activated killer T-cell-originated protein kinase isoform X1. (344 aa)
	F6YY15_CIOIN	ERCC4 domain-containing protein. (826 aa)
	F7BLE6_CIOIN	BHD_3 domain-containing protein. (221 aa)
	F6YVN3_CIOIN	Uncharacterized protein. (165 aa)
	F6PQS1_CIOIN	Protein kinase domain-containing protein. (190 aa)
	F6YSG2_CIOIN	RWD domain-containing protein. (260 aa)
	F6SLD6_CIOIN	Deacetylase sirtuin-type domain-containing protein. (737 aa)
	F6X1D6_CIOIN	RWD domain-containing protein. (156 aa)
	H2XMH8_CIOIN	BHD_1 domain-containing protein. (362 aa)
	H2XN24_CIOIN	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (158 aa)
	H2XR85_CIOIN	USP domain-containing protein; Belongs to the peptidase C19 family. (1053 aa)
	H2XXR3_CIOIN	Poly [ADP-ribose] polymerase. (472 aa)
	H2XYD4_CIOIN	Uncharacterized protein. (216 aa)
	LOC100179616	UmuC domain-containing protein. (440 aa)
	LOC100175682	DNA polymerase delta subunit 3. (469 aa)
	H2Y1U3_CIOIN	Protein kinase domain-containing protein. (1156 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ci-ZF(PARP)-3	F6YY15_CIOIN	ENSCINP00000019848	ENSCINP00000024251	Zinc finger protein.	ERCC4 domain-containing protein.	0.432
Ci-ZF(PARP)-3	F7ANR5_CIOIN	ENSCINP00000019848	ENSCINP00000015292	Zinc finger protein.	CPSF_A domain-containing protein.	0.501
Ci-ZF(PARP)-3	F7BLE6_CIOIN	ENSCINP00000019848	ENSCINP00000024476	Zinc finger protein.	BHD_3 domain-containing protein.	0.528
Ci-ZF(PARP)-3	H2XMH8_CIOIN	ENSCINP00000019848	ENSCINP00000030861	Zinc finger protein.	BHD_1 domain-containing protein.	0.528
Ci-ZF(PARP)-3	H2XXR3_CIOIN	ENSCINP00000019848	ENSCINP00000034447	Zinc finger protein.	Poly [ADP-ribose] polymerase.	0.875
Ci-ZF(PARP)-3	LOC100175879	ENSCINP00000019848	ENSCINP00000002393	Zinc finger protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.495
Ci-ZF(PARP)-3	LOC100179498	ENSCINP00000019848	ENSCINP00000003306	Zinc finger protein.	DNA repair protein complementing XP-A cells homolog.	0.535
F6R7T5_CIOIN	F6SLD6_CIOIN	ENSCINP00000018331	ENSCINP00000027486	Uncharacterized protein.	Deacetylase sirtuin-type domain-containing protein.	0.717
F6R7T5_CIOIN	LOC100179498	ENSCINP00000018331	ENSCINP00000003306	Uncharacterized protein.	DNA repair protein complementing XP-A cells homolog.	0.864
F6R7T5_CIOIN	LOC100187100	ENSCINP00000018331	ENSCINP00000013511	Uncharacterized protein.	Lysine-specific histone demethylase 1A.	0.566
F6RS66_CIOIN	F6SLD6_CIOIN	ENSCINP00000013103	ENSCINP00000027486	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Deacetylase sirtuin-type domain-containing protein.	0.539
F6SLD6_CIOIN	F6R7T5_CIOIN	ENSCINP00000027486	ENSCINP00000018331	Deacetylase sirtuin-type domain-containing protein.	Uncharacterized protein.	0.717
F6SLD6_CIOIN	F6RS66_CIOIN	ENSCINP00000027486	ENSCINP00000013103	Deacetylase sirtuin-type domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.539
F6SLD6_CIOIN	LOC100179498	ENSCINP00000027486	ENSCINP00000003306	Deacetylase sirtuin-type domain-containing protein.	DNA repair protein complementing XP-A cells homolog.	0.488
F6SLD6_CIOIN	LOC100187100	ENSCINP00000027486	ENSCINP00000013511	Deacetylase sirtuin-type domain-containing protein.	Lysine-specific histone demethylase 1A.	0.561
F6TV58_CIOIN	F6YY15_CIOIN	ENSCINP00000008579	ENSCINP00000024251	Uncharacterized protein.	ERCC4 domain-containing protein.	0.496
F6TV58_CIOIN	F6Z8G0_CIOIN	ENSCINP00000008579	ENSCINP00000016265	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.853
F6TV58_CIOIN	H2XN24_CIOIN	ENSCINP00000008579	ENSCINP00000031057	Uncharacterized protein.	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.938
F6WHL2_CIOIN	F6YY15_CIOIN	ENSCINP00000000022	ENSCINP00000024251	UmuC domain-containing protein.	ERCC4 domain-containing protein.	0.513
F6WHL2_CIOIN	LOC100175682	ENSCINP00000000022	ENSCINP00000035623	UmuC domain-containing protein.	DNA polymerase delta subunit 3.	0.520