STRINGSTRING
F6SQS1_CIOIN F6SQS1_CIOIN F6RSF3_CIOIN F6RSF3_CIOIN F7BBJ6_CIOIN F7BBJ6_CIOIN F6PI16_CIOIN F6PI16_CIOIN Rbp1-like Rbp1-like H2XN90_CIOIN H2XN90_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6SQS1_CIOINSET domain-containing protein. (192 aa)
F6RSF3_CIOINSET domain-containing protein. (227 aa)
F7BBJ6_CIOINWD_REPEATS_REGION domain-containing protein. (473 aa)
F6PI16_CIOINUncharacterized protein. (234 aa)
Rbp1-likeARID domain-containing protein. (1195 aa)
H2XN90_CIOINUncharacterized protein. (224 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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