18 items (Ciona intestinalis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6RL41_CIOIN	FAT domain-containing protein. (2944 aa)
	LOC100183795	Inhibitor of growth protein. (401 aa)
	LOC100177411	RuvB-like helicase; Belongs to the RuvB family. (467 aa)
	LOC100183367	RuvB-like helicase; Belongs to the RuvB family. (456 aa)
	LOC100185398	Actin-like protein 6B; Belongs to the actin family. (423 aa)
	F6VS86_CIOIN	AHD domain-containing protein. (660 aa)
	LOC100186846	YEATS domain-containing protein 2. (960 aa)
	F7B7U2_CIOIN	Bromo domain-containing protein. (440 aa)
	F6PHR7_CIOIN	Uncharacterized protein. (228 aa)
	F6PU76_CIOIN	Enhancer of polycomb-like protein. (402 aa)
	LOC100185254	Chromatin modification-related protein MEAF6-like isoform X2. (192 aa)
	tcfl1	Ci-TCFL1 protein. (333 aa)
	LOC100183508	MRG/MORF4L-binding protein-like. (148 aa)
	H2XQZ4_CIOIN	Chromo domain-containing protein. (141 aa)
	H2XWA1_CIOIN	MRG domain-containing protein. (319 aa)
	H2Y0L0_CIOIN	FAT domain-containing protein. (303 aa)
	H2Y2Q0_CIOIN	FATC domain-containing protein; Belongs to the PI3/PI4-kinase family. (450 aa)
	F6WEI4_CIOIN	MRG domain-containing protein. (172 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PHR7_CIOIN	F6PU76_CIOIN	ENSCINP00000018266	ENSCINP00000023865	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.978
F6PHR7_CIOIN	F6RL41_CIOIN	ENSCINP00000018266	ENSCINP00000001174	Uncharacterized protein.	FAT domain-containing protein.	0.732
F6PHR7_CIOIN	F6VS86_CIOIN	ENSCINP00000018266	ENSCINP00000012639	Uncharacterized protein.	AHD domain-containing protein.	0.558
F6PHR7_CIOIN	F6WEI4_CIOIN	ENSCINP00000018266	ENSCINP00000000601	Uncharacterized protein.	MRG domain-containing protein.	0.944
F6PHR7_CIOIN	F7B7U2_CIOIN	ENSCINP00000018266	ENSCINP00000015259	Uncharacterized protein.	Bromo domain-containing protein.	0.916
F6PHR7_CIOIN	H2XQZ4_CIOIN	ENSCINP00000018266	ENSCINP00000032078	Uncharacterized protein.	Chromo domain-containing protein.	0.711
F6PHR7_CIOIN	H2XWA1_CIOIN	ENSCINP00000018266	ENSCINP00000033935	Uncharacterized protein.	MRG domain-containing protein.	0.711
F6PHR7_CIOIN	H2Y0L0_CIOIN	ENSCINP00000018266	ENSCINP00000035444	Uncharacterized protein.	FAT domain-containing protein.	0.871
F6PHR7_CIOIN	H2Y2Q0_CIOIN	ENSCINP00000018266	ENSCINP00000036185	Uncharacterized protein.	FATC domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.871
F6PHR7_CIOIN	LOC100177411	ENSCINP00000018266	ENSCINP00000009659	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.964
F6PHR7_CIOIN	LOC100183367	ENSCINP00000018266	ENSCINP00000009992	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.976
F6PHR7_CIOIN	LOC100183508	ENSCINP00000018266	ENSCINP00000026941	Uncharacterized protein.	MRG/MORF4L-binding protein-like.	0.918
F6PHR7_CIOIN	LOC100183795	ENSCINP00000018266	ENSCINP00000007229	Uncharacterized protein.	Inhibitor of growth protein.	0.950
F6PHR7_CIOIN	LOC100185254	ENSCINP00000018266	ENSCINP00000025901	Uncharacterized protein.	Chromatin modification-related protein MEAF6-like isoform X2.	0.976
F6PHR7_CIOIN	LOC100185398	ENSCINP00000018266	ENSCINP00000010732	Uncharacterized protein.	Actin-like protein 6B; Belongs to the actin family.	0.958
F6PHR7_CIOIN	LOC100186846	ENSCINP00000018266	ENSCINP00000014709	Uncharacterized protein.	YEATS domain-containing protein 2.	0.587
F6PHR7_CIOIN	tcfl1	ENSCINP00000018266	ENSCINP00000026106	Uncharacterized protein.	Ci-TCFL1 protein.	0.946
F6PU76_CIOIN	F6PHR7_CIOIN	ENSCINP00000023865	ENSCINP00000018266	Enhancer of polycomb-like protein.	Uncharacterized protein.	0.978
F6PU76_CIOIN	F6RL41_CIOIN	ENSCINP00000023865	ENSCINP00000001174	Enhancer of polycomb-like protein.	FAT domain-containing protein.	0.839
F6PU76_CIOIN	F6VS86_CIOIN	ENSCINP00000023865	ENSCINP00000012639	Enhancer of polycomb-like protein.	AHD domain-containing protein.	0.832