STRINGSTRING
F6SW03_CIOIN F6SW03_CIOIN F6WSQ4_CIOIN F6WSQ4_CIOIN F6W6K9_CIOIN F6W6K9_CIOIN F6Z5D4_CIOIN F6Z5D4_CIOIN F7B4T0_CIOIN F7B4T0_CIOIN F6RMU1_CIOIN F6RMU1_CIOIN F7B690_CIOIN F7B690_CIOIN LOC100183428 LOC100183428 LOC100184538 LOC100184538 LOC100182525 LOC100182525 Htt Htt LOC100186131 LOC100186131 LOC100180225 LOC100180225 H2XNU4_CIOIN H2XNU4_CIOIN dynlt1 dynlt1 H2XPY4_CIOIN H2XPY4_CIOIN H2XRK6_CIOIN H2XRK6_CIOIN H2XY78_CIOIN H2XY78_CIOIN H2Y204_CIOIN H2Y204_CIOIN H2Y224_CIOIN H2Y224_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6SW03_CIOINUncharacterized protein. (362 aa)
F6WSQ4_CIOINTOG domain-containing protein. (201 aa)
F6W6K9_CIOINUncharacterized protein. (1344 aa)
F6Z5D4_CIOINUncharacterized protein. (378 aa)
F7B4T0_CIOINNUDE_C domain-containing protein. (329 aa)
F6RMU1_CIOINImportin N-terminal domain-containing protein. (883 aa)
F7B690_CIOINCAP-Gly domain-containing protein. (1092 aa)
LOC100183428Uncharacterized protein. (786 aa)
LOC100184538Uncharacterized protein. (623 aa)
LOC100182525Uncharacterized protein. (461 aa)
HttUncharacterized protein. (639 aa)
LOC100186131Nucleolar and spindle-associated protein 1-like isoform X1. (474 aa)
LOC100180225Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (411 aa)
H2XNU4_CIOINUncharacterized protein. (530 aa)
dynlt1Tctex1-related dynein light chain. (113 aa)
H2XPY4_CIOINUncharacterized protein. (95 aa)
H2XRK6_CIOINHORMA domain-containing protein. (87 aa)
H2XY78_CIOINUncharacterized protein. (207 aa)
H2Y204_CIOINUncharacterized protein. (246 aa)
H2Y224_CIOINFAM193_C domain-containing protein. (180 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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