STRINGSTRING
F6WBK6_CIOIN F6WBK6_CIOIN F6ZGJ4_CIOIN F6ZGJ4_CIOIN LOC100184123 LOC100184123 H2XZP2_CIOIN H2XZP2_CIOIN H2Y1T8_CIOIN H2Y1T8_CIOIN Smoothened Smoothened LOC100183452 LOC100183452 LOC100184817 LOC100184817
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6WBK6_CIOINTPR_REGION domain-containing protein. (446 aa)
F6ZGJ4_CIOINUncharacterized protein. (388 aa)
LOC100184123Bardet-Biedl syndrome 2 protein homolog. (708 aa)
H2XZP2_CIOINPlsC domain-containing protein. (185 aa)
H2Y1T8_CIOING_PROTEIN_RECEP_F1_2 domain-containing protein. (149 aa)
SmoothenedUncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (441 aa)
LOC100183452Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (203 aa)
LOC100184817Growth hormone secretagogue receptor type 1-like. (366 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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