STRINGSTRING
F6RJ65_CIOIN F6RJ65_CIOIN F7BAT7_CIOIN F7BAT7_CIOIN F6ZBE4_CIOIN F6ZBE4_CIOIN F6RZS3_CIOIN F6RZS3_CIOIN F6XFP6_CIOIN F6XFP6_CIOIN LOC100182748 LOC100182748 F7AH61_CIOIN F7AH61_CIOIN LOC100185806 LOC100185806 LOC100187055 LOC100187055 F7BEE9_CIOIN F7BEE9_CIOIN F6UCG0_CIOIN F6UCG0_CIOIN F7ARU3_CIOIN F7ARU3_CIOIN LOC100176493 LOC100176493 F6S7G7_CIOIN F6S7G7_CIOIN F6YIR9_CIOIN F6YIR9_CIOIN F6UX10_CIOIN F6UX10_CIOIN LOC100186680 LOC100186680 F6Y8G0_CIOIN F6Y8G0_CIOIN F6WQK5_CIOIN F6WQK5_CIOIN nk4 nk4 F6YVN3_CIOIN F6YVN3_CIOIN LOC100175993 LOC100175993 zf(ring)-23 zf(ring)-23 H2XRR7_CIOIN H2XRR7_CIOIN LOC100186865 LOC100186865 H2XU65_CIOIN H2XU65_CIOIN H2XX24_CIOIN H2XX24_CIOIN H2Y1I3_CIOIN H2Y1I3_CIOIN H2Y2T2_CIOIN H2Y2T2_CIOIN LOC100185957 LOC100185957
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6RJ65_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
F7BAT7_CIOINProhibitin. (271 aa)
F6ZBE4_CIOINUncharacterized protein. (239 aa)
F6RZS3_CIOINUncharacterized protein. (1132 aa)
F6XFP6_CIOINMARVEL domain-containing protein. (442 aa)
LOC100182748DNA_mis_repair domain-containing protein. (751 aa)
F7AH61_CIOINUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (283 aa)
LOC100185806DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1250 aa)
LOC100187055SEFIR domain-containing protein. (513 aa)
F7BEE9_CIOINDUF3342 domain-containing protein. (678 aa)
F6UCG0_CIOINDNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (943 aa)
F7ARU3_CIOINUncharacterized protein. (444 aa)
LOC100176493AAA domain-containing protein. (844 aa)
F6S7G7_CIOINSH2 domain-containing protein. (145 aa)
F6YIR9_CIOINLisH domain-containing protein. (1416 aa)
F6UX10_CIOINDNA_LIGASE_A3 domain-containing protein; Belongs to the ATP-dependent DNA ligase family. (655 aa)
LOC100186680Caspase recruitment domain-containing protein 11-like isoform X1. (418 aa)
F6Y8G0_CIOINUncharacterized protein. (266 aa)
F6WQK5_CIOINBZIP domain-containing protein. (182 aa)
nk4Transcription factor protein. (623 aa)
F6YVN3_CIOINUncharacterized protein. (165 aa)
LOC100175993PH domain-containing protein. (457 aa)
zf(ring)-23RING-type domain-containing protein. (319 aa)
H2XRR7_CIOINJ domain-containing protein. (229 aa)
LOC100186865CKLF-like MARVEL transmembrane domain-containing protein 7. (163 aa)
H2XU65_CIOINKH_dom_type_1 domain-containing protein. (241 aa)
H2XX24_CIOINSH2 domain-containing protein. (126 aa)
H2Y1I3_CIOINUncharacterized protein. (231 aa)
H2Y2T2_CIOINFAT domain-containing protein. (235 aa)
LOC100185957Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X1. (624 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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