STRINGSTRING
F6VK85_CIOIN F6VK85_CIOIN F7B867_CIOIN F7B867_CIOIN F6XTZ0_CIOIN F6XTZ0_CIOIN LOC100185712 LOC100185712 LOC100175648 LOC100175648 LOC100175728 LOC100175728 F6QIK7_CIOIN F6QIK7_CIOIN LOC100179182 LOC100179182 LOC100179473 LOC100179473 F6YGD1_CIOIN F6YGD1_CIOIN F6WKD5_CIOIN F6WKD5_CIOIN F7B5P4_CIOIN F7B5P4_CIOIN F7AVY6_CIOIN F7AVY6_CIOIN F6ZHD7_CIOIN F6ZHD7_CIOIN LOC100175053 LOC100175053 LOC100182700 LOC100182700 F6QLN4_CIOIN F6QLN4_CIOIN F6QKM5_CIOIN F6QKM5_CIOIN LOC100175014 LOC100175014 LOC100177683 LOC100177683 F6VKC0_CIOIN F6VKC0_CIOIN F6SVM4_CIOIN F6SVM4_CIOIN F6T7B1_CIOIN F6T7B1_CIOIN F6SXC5_CIOIN F6SXC5_CIOIN F6SXF0_CIOIN F6SXF0_CIOIN F6SYV7_CIOIN F6SYV7_CIOIN F6PGW6_CIOIN F6PGW6_CIOIN F6WEC9_CIOIN F6WEC9_CIOIN F6WFN8_CIOIN F6WFN8_CIOIN LOC100175466 LOC100175466 H2XM17_CIOIN H2XM17_CIOIN sec61g sec61g sec61g-2 sec61g-2 LOC100180055 LOC100180055 F6VG31_CIOIN F6VG31_CIOIN F6XQM9_CIOIN F6XQM9_CIOIN F6ZY58_CIOIN F6ZY58_CIOIN F6S3Q7_CIOIN F6S3Q7_CIOIN F6ZM86_CIOIN F6ZM86_CIOIN LOC100186609 LOC100186609 LOC101242470 LOC101242470 F6UK82_CIOIN F6UK82_CIOIN LOC100175511 LOC100175511 LOC100182803 LOC100182803 F6PZD7_CIOIN F6PZD7_CIOIN H2XSS0_CIOIN H2XSS0_CIOIN H2XVS6_CIOIN H2XVS6_CIOIN H2XWT8_CIOIN H2XWT8_CIOIN LOC100179843 LOC100179843 H2Y066_CIOIN H2Y066_CIOIN F6TDQ4_CIOIN F6TDQ4_CIOIN LOC100178387 LOC100178387 F6YSG2_CIOIN F6YSG2_CIOIN LOC100181545 LOC100181545 LOC100184303 LOC100184303 F7AIB9_CIOIN F7AIB9_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6VK85_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
F7B867_CIOINRRM domain-containing protein. (133 aa)
F6XTZ0_CIOINRRM domain-containing protein. (405 aa)
LOC100185712Uncharacterized protein. (483 aa)
LOC100175648pre-rRNA-processing protein TSR2 homolog. (194 aa)
LOC100175728Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (583 aa)
F6QIK7_CIOINTranslation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (625 aa)
LOC100179182Uncharacterized protein. (605 aa)
LOC100179473Guanine nucleotide-binding protein subunit beta-2-like 1. (323 aa)
F6YGD1_CIOINSignal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. (594 aa)
F6WKD5_CIOINR3H domain-containing protein. (1049 aa)
F7B5P4_CIOINUncharacterized protein. (714 aa)
F7AVY6_CIOINUncharacterized protein. (705 aa)
F6ZHD7_CIOINWD_REPEATS_REGION domain-containing protein. (1093 aa)
LOC100175053Uncharacterized protein LOC100175053. (189 aa)
LOC100182700SAP domain-containing protein. (320 aa)
F6QLN4_CIOINHABP4_PAI-RBP1 domain-containing protein. (311 aa)
F6QKM5_CIOINMago-bind domain-containing protein. (209 aa)
LOC100175014LETM1 domain-containing protein 1-like. (388 aa)
LOC100177683Transmembrane protein 147-like. (225 aa)
F6VKC0_CIOINCalcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling. (184 aa)
F6SVM4_CIOINEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (221 aa)
F6T7B1_CIOINUncharacterized protein. (328 aa)
F6SXC5_CIOINTTC5_OB domain-containing protein. (109 aa)
F6SXF0_CIOINUncharacterized protein. (324 aa)
F6SYV7_CIOINUncharacterized protein. (590 aa)
F6PGW6_CIOINTr-type G domain-containing protein. (457 aa)
F6WEC9_CIOINUncharacterized protein. (1002 aa)
F6WFN8_CIOINRING-type domain-containing protein. (237 aa)
LOC100175466Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (97 aa)
H2XM17_CIOINFAT domain-containing protein. (187 aa)
sec61gProtein transport protein Sec61 subunit gamma; Necessary for protein translocation in the endoplasmic reticulum. (68 aa)
sec61g-2Sec61 protein. (68 aa)
LOC100180055Uncharacterized protein LOC100180055. (140 aa)
F6VG31_CIOINUncharacterized protein. (1127 aa)
F6XQM9_CIOINTOG domain-containing protein. (2637 aa)
F6ZY58_CIOINPeptidase_M28 domain-containing protein. (554 aa)
F6S3Q7_CIOINDolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...] (630 aa)
F6ZM86_CIOINPlug_translocon domain-containing protein. (454 aa)
LOC100186609Uncharacterized protein; Belongs to the heat shock protein 70 family. (671 aa)
LOC101242470Uncharacterized protein; Belongs to the heat shock protein 70 family. (659 aa)
F6UK82_CIOINUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (544 aa)
LOC100175511Growth arrest and DNA damage-inducible proteins-interacting protein 1-like. (219 aa)
LOC100182803Lymphocyte expansion molecule-like. (215 aa)
F6PZD7_CIOINHflx-type G domain-containing protein. (519 aa)
H2XSS0_CIOINeIF-5a domain-containing protein. (99 aa)
H2XVS6_CIOINUncharacterized protein. (272 aa)
H2XWT8_CIOINUncharacterized protein. (206 aa)
LOC100179843Uncharacterized protein LOC100179843. (324 aa)
H2Y066_CIOINUncharacterized protein. (361 aa)
F6TDQ4_CIOINUbiquitin-like domain-containing protein. (251 aa)
LOC100178387Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
F6YSG2_CIOINRWD domain-containing protein. (260 aa)
LOC100181545Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP. (400 aa)
LOC100184303Uncharacterized protein. (463 aa)
F7AIB9_CIOINUncharacterized protein. (271 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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