(18 nodes) Receptor clustering network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XT32_CIOIN	Uncharacterized protein. (127 aa)
	H2XRP4_CIOIN	Uncharacterized protein. (126 aa)
	F6ZH24_CIOIN	Uncharacterized protein. (1903 aa)
	F7A8B4_CIOIN	Uncharacterized protein. (495 aa)
	F7A801_CIOIN	Uncharacterized protein. (389 aa)
	LOC100181289	Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	F6YC82_CIOIN	SARAH domain-containing protein. (138 aa)
	fta	Uncharacterized protein. (127 aa)
	F6WLW9_CIOIN	Uncharacterized protein. (1384 aa)
	F6PLQ2_CIOIN	Uncharacterized protein; Belongs to the MAGUK family. (971 aa)
	F6ZYQ8_CIOIN	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (211 aa)
	H2Y0V6_CIOIN	Uncharacterized protein. (204 aa)
	H2Y0C2_CIOIN	Uncharacterized protein. (138 aa)
	LOC100184009	Sjoegren syndrome nuclear autoantigen 1 homolog. (130 aa)
	H2XXW3_CIOIN	Uncharacterized protein. (851 aa)
	H2XXS6_CIOIN	MoCF_biosynth domain-containing protein. (151 aa)
	H2XUG5_CIOIN	Uncharacterized protein. (826 aa)
	H2XU25_CIOIN	NtA domain-containing protein. (184 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PLQ2_CIOIN	F7A801_CIOIN	ENSCINP00000009884	ENSCINP00000013770	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.434
F6PLQ2_CIOIN	F7A8B4_CIOIN	ENSCINP00000009884	ENSCINP00000013766	Uncharacterized protein; Belongs to the MAGUK family.	Uncharacterized protein.	0.434
F6ZYQ8_CIOIN	H2XXW3_CIOIN	ENSCINP00000005689	ENSCINP00000034497	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.	Uncharacterized protein.	0.905
F7A801_CIOIN	F6PLQ2_CIOIN	ENSCINP00000013770	ENSCINP00000009884	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.434
F7A801_CIOIN	F7A8B4_CIOIN	ENSCINP00000013770	ENSCINP00000013766	Uncharacterized protein.	Uncharacterized protein.	0.900
F7A8B4_CIOIN	F6PLQ2_CIOIN	ENSCINP00000013766	ENSCINP00000009884	Uncharacterized protein.	Uncharacterized protein; Belongs to the MAGUK family.	0.434
F7A8B4_CIOIN	F7A801_CIOIN	ENSCINP00000013766	ENSCINP00000013770	Uncharacterized protein.	Uncharacterized protein.	0.900
H2XRP4_CIOIN	H2XT32_CIOIN	ENSCINP00000032328	ENSCINP00000032816	Uncharacterized protein.	Uncharacterized protein.	0.535
H2XT32_CIOIN	H2XRP4_CIOIN	ENSCINP00000032816	ENSCINP00000032328	Uncharacterized protein.	Uncharacterized protein.	0.535
H2XT32_CIOIN	H2Y0C2_CIOIN	ENSCINP00000032816	ENSCINP00000035356	Uncharacterized protein.	Uncharacterized protein.	0.533
H2XT32_CIOIN	H2Y0V6_CIOIN	ENSCINP00000032816	ENSCINP00000035540	Uncharacterized protein.	Uncharacterized protein.	0.528
H2XXW3_CIOIN	F6ZYQ8_CIOIN	ENSCINP00000034497	ENSCINP00000005689	Uncharacterized protein.	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.	0.905
H2Y0C2_CIOIN	H2XT32_CIOIN	ENSCINP00000035356	ENSCINP00000032816	Uncharacterized protein.	Uncharacterized protein.	0.533
H2Y0V6_CIOIN	H2XT32_CIOIN	ENSCINP00000035540	ENSCINP00000032816	Uncharacterized protein.	Uncharacterized protein.	0.528