(14 nodes) Organelle membrane contact site network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100186582	Phosphoinositide 3-kinase regulatory subunit 4. (1337 aa)
	LOC100181148	Syntaxin-17-like. (363 aa)
	F6W8F2_CIOIN	Uncharacterized protein. (216 aa)
	LOC100182206	Transmembrane protein 41B isoform X1. (433 aa)
	F6SFB8_CIOIN	Uncharacterized protein. (493 aa)
	LOC100178266	Uncharacterized protein. (213 aa)
	LOC100182691	SAC domain-containing protein. (590 aa)
	LOC100184496	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family. (304 aa)
	F6ZGK8_CIOIN	Uncharacterized protein. (639 aa)
	LOC100185535	Motile sperm domain-containing protein 2. (246 aa)
	LOC100182401	Beclin 1-associated autophagy-related key regulator. (512 aa)
	H2XM98_CIOIN	Uncharacterized protein. (211 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (268 aa)
	H2Y0K8_CIOIN	Uncharacterized protein. (467 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SFB8_CIOIN	H2Y0K8_CIOIN	ENSCINP00000012457	ENSCINP00000035442	Uncharacterized protein.	Uncharacterized protein.	0.593
F6SFB8_CIOIN	LOC100185535	ENSCINP00000012457	ENSCINP00000027597	Uncharacterized protein.	Motile sperm domain-containing protein 2.	0.593
F6W8F2_CIOIN	LOC100184496	ENSCINP00000007680	ENSCINP00000023561	Uncharacterized protein.	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	0.914
H2Y0K8_CIOIN	F6SFB8_CIOIN	ENSCINP00000035442	ENSCINP00000012457	Uncharacterized protein.	Uncharacterized protein.	0.593
LOC100181148	LOC100182401	ENSCINP00000007118	ENSCINP00000029979	Syntaxin-17-like.	Beclin 1-associated autophagy-related key regulator.	0.971
LOC100181148	LOC100186582	ENSCINP00000007118	ENSCINP00000005460	Syntaxin-17-like.	Phosphoinositide 3-kinase regulatory subunit 4.	0.531
LOC100181148	atg5	ENSCINP00000007118	ENSCINP00000033358	Syntaxin-17-like.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.646
LOC100182401	LOC100181148	ENSCINP00000029979	ENSCINP00000007118	Beclin 1-associated autophagy-related key regulator.	Syntaxin-17-like.	0.971
LOC100182401	LOC100186582	ENSCINP00000029979	ENSCINP00000005460	Beclin 1-associated autophagy-related key regulator.	Phosphoinositide 3-kinase regulatory subunit 4.	0.997
LOC100182401	atg5	ENSCINP00000029979	ENSCINP00000033358	Beclin 1-associated autophagy-related key regulator.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.847
LOC100184496	F6W8F2_CIOIN	ENSCINP00000023561	ENSCINP00000007680	Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.	Uncharacterized protein.	0.914
LOC100185535	F6SFB8_CIOIN	ENSCINP00000027597	ENSCINP00000012457	Motile sperm domain-containing protein 2.	Uncharacterized protein.	0.593
LOC100186582	LOC100181148	ENSCINP00000005460	ENSCINP00000007118	Phosphoinositide 3-kinase regulatory subunit 4.	Syntaxin-17-like.	0.531
LOC100186582	LOC100182401	ENSCINP00000005460	ENSCINP00000029979	Phosphoinositide 3-kinase regulatory subunit 4.	Beclin 1-associated autophagy-related key regulator.	0.997
LOC100186582	atg5	ENSCINP00000005460	ENSCINP00000033358	Phosphoinositide 3-kinase regulatory subunit 4.	Autophagy protein 5; Involved in autophagic vesicle formation.	0.855
atg5	LOC100181148	ENSCINP00000033358	ENSCINP00000007118	Autophagy protein 5; Involved in autophagic vesicle formation.	Syntaxin-17-like.	0.646
atg5	LOC100182401	ENSCINP00000033358	ENSCINP00000029979	Autophagy protein 5; Involved in autophagic vesicle formation.	Beclin 1-associated autophagy-related key regulator.	0.847
atg5	LOC100186582	ENSCINP00000033358	ENSCINP00000005460	Autophagy protein 5; Involved in autophagic vesicle formation.	Phosphoinositide 3-kinase regulatory subunit 4.	0.855