(5 nodes) Meiotic telomere clustering network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100182748	DNA_mis_repair domain-containing protein. (751 aa)
	F6RJ65_CIOIN	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
	LOC100180409	Meiotic recombination protein SPO11. (385 aa)
	LOC100184172	Uncharacterized protein. (391 aa)
	H2Y2T2_CIOIN	FAT domain-containing protein. (235 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RJ65_CIOIN	H2Y2T2_CIOIN	ENSCINP00000001490	ENSCINP00000036217	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.949
F6RJ65_CIOIN	LOC100180409	ENSCINP00000001490	ENSCINP00000009041	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Meiotic recombination protein SPO11.	0.496
F6RJ65_CIOIN	LOC100182748	ENSCINP00000001490	ENSCINP00000005229	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	DNA_mis_repair domain-containing protein.	0.652
H2Y2T2_CIOIN	F6RJ65_CIOIN	ENSCINP00000036217	ENSCINP00000001490	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.949
H2Y2T2_CIOIN	LOC100180409	ENSCINP00000036217	ENSCINP00000009041	FAT domain-containing protein.	Meiotic recombination protein SPO11.	0.496
H2Y2T2_CIOIN	LOC100182748	ENSCINP00000036217	ENSCINP00000005229	FAT domain-containing protein.	DNA_mis_repair domain-containing protein.	0.652
LOC100180409	F6RJ65_CIOIN	ENSCINP00000009041	ENSCINP00000001490	Meiotic recombination protein SPO11.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.496
LOC100180409	H2Y2T2_CIOIN	ENSCINP00000009041	ENSCINP00000036217	Meiotic recombination protein SPO11.	FAT domain-containing protein.	0.496
LOC100180409	LOC100182748	ENSCINP00000009041	ENSCINP00000005229	Meiotic recombination protein SPO11.	DNA_mis_repair domain-containing protein.	0.642
LOC100182748	F6RJ65_CIOIN	ENSCINP00000005229	ENSCINP00000001490	DNA_mis_repair domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.652
LOC100182748	H2Y2T2_CIOIN	ENSCINP00000005229	ENSCINP00000036217	DNA_mis_repair domain-containing protein.	FAT domain-containing protein.	0.652
LOC100182748	LOC100180409	ENSCINP00000005229	ENSCINP00000009041	DNA_mis_repair domain-containing protein.	Meiotic recombination protein SPO11.	0.642