STRINGSTRING
LOC100185043 LOC100185043 F7AAA1_CIOIN F7AAA1_CIOIN F7BML6_CIOIN F7BML6_CIOIN Ic1 Ic1 F6VYZ5_CIOIN F6VYZ5_CIOIN LOC778840 LOC778840 H2Y2A1_CIOIN H2Y2A1_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100185043Uncharacterized protein. (495 aa)
F7AAA1_CIOINUncharacterized protein. (361 aa)
F7BML6_CIOINWD_REPEATS_REGION domain-containing protein. (528 aa)
Ic1Uncharacterized protein. (594 aa)
F6VYZ5_CIOINWD_REPEATS_REGION domain-containing protein. (778 aa)
LOC778840WD_REPEATS_REGION domain-containing protein. (661 aa)
H2Y2A1_CIOINUncharacterized protein. (215 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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