STRINGSTRING
LOC100175816 LOC100175816 F7ACP0_CIOIN F7ACP0_CIOIN gabpalpha gabpalpha LOC100176678 LOC100176678 LOC100178387 LOC100178387 F6SYE0_CIOIN F6SYE0_CIOIN F6W3W9_CIOIN F6W3W9_CIOIN F6T2G1_CIOIN F6T2G1_CIOIN LOC100180326 LOC100180326 H2XM17_CIOIN H2XM17_CIOIN Q1RPY5_CIOIN Q1RPY5_CIOIN H2XRZ5_CIOIN H2XRZ5_CIOIN H2XU53_CIOIN H2XU53_CIOIN H2XUU5_CIOIN H2XUU5_CIOIN H2XWT8_CIOIN H2XWT8_CIOIN H2Y066_CIOIN H2Y066_CIOIN H2Y0R6_CIOIN H2Y0R6_CIOIN H2Y1Q5_CIOIN H2Y1Q5_CIOIN H2Y1S8_CIOIN H2Y1S8_CIOIN H2Y2G5_CIOIN H2Y2G5_CIOIN H2Y2V4_CIOIN H2Y2V4_CIOIN LOC494392 LOC494392 zf(c2h2)-129 zf(c2h2)-129 F6VXC2_CIOIN F6VXC2_CIOIN meis meis LOC100178307 LOC100178307 myc myc F6S5I8_CIOIN F6S5I8_CIOIN LOC100178665 LOC100178665 F6TLB6_CIOIN F6TLB6_CIOIN F6WMR0_CIOIN F6WMR0_CIOIN F6VK85_CIOIN F6VK85_CIOIN LOC100187261 LOC100187261 LOC100176290 LOC100176290
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100175816TPR_REGION domain-containing protein. (1034 aa)
F7ACP0_CIOINUncharacterized protein. (301 aa)
gabpalphaGA repeat binding protein alpha homolog. (364 aa)
LOC100176678PITH domain-containing protein 1. (209 aa)
LOC100178387Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
F6SYE0_CIOINProtein kinase domain-containing protein. (216 aa)
F6W3W9_CIOINUncharacterized protein. (758 aa)
F6T2G1_CIOINUncharacterized protein. (298 aa)
LOC100180326Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (211 aa)
H2XM17_CIOINFAT domain-containing protein. (187 aa)
Q1RPY5_CIOINZinc finger protein. (579 aa)
H2XRZ5_CIOINUncharacterized protein. (217 aa)
H2XU53_CIOINUncharacterized protein; Belongs to the heat shock protein 70 family. (643 aa)
H2XUU5_CIOINUncharacterized protein. (532 aa)
H2XWT8_CIOINUncharacterized protein. (206 aa)
H2Y066_CIOINUncharacterized protein. (361 aa)
H2Y0R6_CIOINMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (227 aa)
H2Y1Q5_CIOINSAP domain-containing protein. (353 aa)
H2Y1S8_CIOINCASPASE_P20 domain-containing protein; Belongs to the peptidase C14A family. (162 aa)
H2Y2G5_CIOINMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (160 aa)
H2Y2V4_CIOINProtein kinase domain-containing protein. (209 aa)
LOC494392Uncharacterized protein LOC494392. (131 aa)
zf(c2h2)-129Zinc finger protein ZF(C2H2)-129 isoform X1. (687 aa)
F6VXC2_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (262 aa)
meisHomeobox domain-containing protein. (554 aa)
LOC100178307Fatty acid hydroxylase domain-containing protein 2; Belongs to the sterol desaturase family. (332 aa)
mycTranscription factor protein isoform X1. (681 aa)
F6S5I8_CIOINUncharacterized protein. (654 aa)
LOC100178665Fatty acid hydroxylase domain-containing protein 2-like; Belongs to the sterol desaturase family. (301 aa)
F6TLB6_CIOINUncharacterized protein. (891 aa)
F6WMR0_CIOINFatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (238 aa)
F6VK85_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
LOC100187261Protein FAM210B, mitochondrial isoform X1. (206 aa)
LOC100176290Uncharacterized protein LOC100176290 isoform X4. (787 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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