(29 nodes) Positive regulation of DNA recombination network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	F6XA18_CIOIN	PWWP domain-containing protein. (177 aa)
	F6PU76_CIOIN	Enhancer of polycomb-like protein. (402 aa)
	H2XXZ3_CIOIN	Uncharacterized protein. (870 aa)
	F6PHR7_CIOIN	Uncharacterized protein. (228 aa)
	LOC100176493	AAA domain-containing protein. (844 aa)
	F6VEQ7_CIOIN	RFX-type winged-helix domain-containing protein. (624 aa)
	tcfl1	Ci-TCFL1 protein. (333 aa)
	F7B7U2_CIOIN	Bromo domain-containing protein. (440 aa)
	LOC100183508	MRG/MORF4L-binding protein-like. (148 aa)
	F6PXA9_CIOIN	Uncharacterized protein. (804 aa)
	F6UCG0_CIOIN	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (943 aa)
	F6ZZC3_CIOIN	Uncharacterized protein. (324 aa)
	F6R982_CIOIN	WD_REPEATS_REGION domain-containing protein. (433 aa)
	LOC100177411	RuvB-like helicase; Belongs to the RuvB family. (467 aa)
	F7AUL7_CIOIN	Uncharacterized protein. (989 aa)
	H2XXR3_CIOIN	Poly [ADP-ribose] polymerase. (472 aa)
	H2XW16_CIOIN	Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. (216 aa)
	F6TSV6_CIOIN	WD_REPEATS_REGION domain-containing protein. (687 aa)
	F6YH93_CIOIN	Uncharacterized protein. (1111 aa)
	LOC100182748	DNA_mis_repair domain-containing protein. (751 aa)
	mT	Uncharacterized protein. (812 aa)
	F6RL41_CIOIN	FAT domain-containing protein. (2944 aa)
	F6RSF3_CIOIN	SET domain-containing protein. (227 aa)
	F6UXY9_CIOIN	ARID domain-containing protein. (428 aa)
	Ci-ZF(PARP)-3	Zinc finger protein. (565 aa)
	LOC100186221	Uncharacterized protein. (269 aa)
	H2Y2Q0_CIOIN	FATC domain-containing protein; Belongs to the PI3/PI4-kinase family. (450 aa)
	H2Y0L0_CIOIN	FAT domain-containing protein. (303 aa)
	H2XU65_CIOIN	KH_dom_type_1 domain-containing protein. (241 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Ci-ZF(PARP)-3	F6YH93_CIOIN	ENSCINP00000019848	ENSCINP00000008456	Zinc finger protein.	Uncharacterized protein.	0.650
Ci-ZF(PARP)-3	H2XXR3_CIOIN	ENSCINP00000019848	ENSCINP00000034447	Zinc finger protein.	Poly [ADP-ribose] polymerase.	0.875
F6PHR7_CIOIN	F6PU76_CIOIN	ENSCINP00000018266	ENSCINP00000023865	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.978
F6PHR7_CIOIN	F6RL41_CIOIN	ENSCINP00000018266	ENSCINP00000001174	Uncharacterized protein.	FAT domain-containing protein.	0.732
F6PHR7_CIOIN	F7B7U2_CIOIN	ENSCINP00000018266	ENSCINP00000015259	Uncharacterized protein.	Bromo domain-containing protein.	0.916
F6PHR7_CIOIN	H2Y0L0_CIOIN	ENSCINP00000018266	ENSCINP00000035444	Uncharacterized protein.	FAT domain-containing protein.	0.871
F6PHR7_CIOIN	H2Y2Q0_CIOIN	ENSCINP00000018266	ENSCINP00000036185	Uncharacterized protein.	FATC domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.871
F6PHR7_CIOIN	LOC100177411	ENSCINP00000018266	ENSCINP00000009659	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.964
F6PHR7_CIOIN	LOC100183508	ENSCINP00000018266	ENSCINP00000026941	Uncharacterized protein.	MRG/MORF4L-binding protein-like.	0.918
F6PHR7_CIOIN	tcfl1	ENSCINP00000018266	ENSCINP00000026106	Uncharacterized protein.	Ci-TCFL1 protein.	0.946
F6PU76_CIOIN	F6PHR7_CIOIN	ENSCINP00000023865	ENSCINP00000018266	Enhancer of polycomb-like protein.	Uncharacterized protein.	0.978
F6PU76_CIOIN	F6RL41_CIOIN	ENSCINP00000023865	ENSCINP00000001174	Enhancer of polycomb-like protein.	FAT domain-containing protein.	0.839
F6PU76_CIOIN	F7B7U2_CIOIN	ENSCINP00000023865	ENSCINP00000015259	Enhancer of polycomb-like protein.	Bromo domain-containing protein.	0.851
F6PU76_CIOIN	H2Y0L0_CIOIN	ENSCINP00000023865	ENSCINP00000035444	Enhancer of polycomb-like protein.	FAT domain-containing protein.	0.923
F6PU76_CIOIN	H2Y2Q0_CIOIN	ENSCINP00000023865	ENSCINP00000036185	Enhancer of polycomb-like protein.	FATC domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.923
F6PU76_CIOIN	LOC100177411	ENSCINP00000023865	ENSCINP00000009659	Enhancer of polycomb-like protein.	RuvB-like helicase; Belongs to the RuvB family.	0.879
F6PU76_CIOIN	LOC100183508	ENSCINP00000023865	ENSCINP00000026941	Enhancer of polycomb-like protein.	MRG/MORF4L-binding protein-like.	0.977
F6PU76_CIOIN	tcfl1	ENSCINP00000023865	ENSCINP00000026106	Enhancer of polycomb-like protein.	Ci-TCFL1 protein.	0.613
F6R982_CIOIN	LOC100177411	ENSCINP00000009975	ENSCINP00000009659	WD_REPEATS_REGION domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.545
F6RL41_CIOIN	F6PHR7_CIOIN	ENSCINP00000001174	ENSCINP00000018266	FAT domain-containing protein.	Uncharacterized protein.	0.732