(6 nodes) Aldehyde biosynthetic process network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100179166	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family. (298 aa)
	LOC100176842	Uncharacterized protein LOC100176842 isoform X2. (222 aa)
	F7A429_CIOIN	Transket_pyr domain-containing protein. (631 aa)
	LOC100183090	Triosephosphate isomerase. (247 aa)
	F6RT01_CIOIN	Uncharacterized protein. (253 aa)
	LOC100178162	Pyridoxal kinase-like. (308 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6RT01_CIOIN	LOC100176842	ENSCINP00000011903	ENSCINP00000012919	Uncharacterized protein.	Uncharacterized protein LOC100176842 isoform X2.	0.966
F6RT01_CIOIN	LOC100178162	ENSCINP00000011903	ENSCINP00000009471	Uncharacterized protein.	Pyridoxal kinase-like.	0.989
F6RT01_CIOIN	LOC100179166	ENSCINP00000011903	ENSCINP00000013057	Uncharacterized protein.	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	0.949
F6RT01_CIOIN	LOC100183090	ENSCINP00000011903	ENSCINP00000013486	Uncharacterized protein.	Triosephosphate isomerase.	0.560
F7A429_CIOIN	LOC100176842	ENSCINP00000015532	ENSCINP00000012919	Transket_pyr domain-containing protein.	Uncharacterized protein LOC100176842 isoform X2.	0.800
F7A429_CIOIN	LOC100179166	ENSCINP00000015532	ENSCINP00000013057	Transket_pyr domain-containing protein.	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	0.822
F7A429_CIOIN	LOC100183090	ENSCINP00000015532	ENSCINP00000013486	Transket_pyr domain-containing protein.	Triosephosphate isomerase.	0.963
LOC100176842	F6RT01_CIOIN	ENSCINP00000012919	ENSCINP00000011903	Uncharacterized protein LOC100176842 isoform X2.	Uncharacterized protein.	0.966
LOC100176842	F7A429_CIOIN	ENSCINP00000012919	ENSCINP00000015532	Uncharacterized protein LOC100176842 isoform X2.	Transket_pyr domain-containing protein.	0.800
LOC100176842	LOC100178162	ENSCINP00000012919	ENSCINP00000009471	Uncharacterized protein LOC100176842 isoform X2.	Pyridoxal kinase-like.	0.953
LOC100176842	LOC100179166	ENSCINP00000012919	ENSCINP00000013057	Uncharacterized protein LOC100176842 isoform X2.	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	0.999
LOC100178162	F6RT01_CIOIN	ENSCINP00000009471	ENSCINP00000011903	Pyridoxal kinase-like.	Uncharacterized protein.	0.989
LOC100178162	LOC100176842	ENSCINP00000009471	ENSCINP00000012919	Pyridoxal kinase-like.	Uncharacterized protein LOC100176842 isoform X2.	0.953
LOC100178162	LOC100179166	ENSCINP00000009471	ENSCINP00000013057	Pyridoxal kinase-like.	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	0.926
LOC100179166	F6RT01_CIOIN	ENSCINP00000013057	ENSCINP00000011903	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	Uncharacterized protein.	0.949
LOC100179166	F7A429_CIOIN	ENSCINP00000013057	ENSCINP00000015532	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	Transket_pyr domain-containing protein.	0.822
LOC100179166	LOC100176842	ENSCINP00000013057	ENSCINP00000012919	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	Uncharacterized protein LOC100176842 isoform X2.	0.999
LOC100179166	LOC100178162	ENSCINP00000013057	ENSCINP00000009471	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	Pyridoxal kinase-like.	0.926
LOC100179166	LOC100183090	ENSCINP00000013057	ENSCINP00000013486	Pyridoxal 5'-phosphate synthase subunit SNZERR; Belongs to the PdxS/SNZ family.	Triosephosphate isomerase.	0.418
LOC100183090	F6RT01_CIOIN	ENSCINP00000013486	ENSCINP00000011903	Triosephosphate isomerase.	Uncharacterized protein.	0.560