STRINGSTRING
F7A0P0_CIOIN F7A0P0_CIOIN LOC100180482 LOC100180482 F6ZGA4_CIOIN F6ZGA4_CIOIN F6RJ65_CIOIN F6RJ65_CIOIN F7BAC4_CIOIN F7BAC4_CIOIN foxj2 foxj2 F6YKR1_CIOIN F6YKR1_CIOIN F6VD75_CIOIN F6VD75_CIOIN F6WSQ4_CIOIN F6WSQ4_CIOIN F6W6K9_CIOIN F6W6K9_CIOIN LOC100179977 LOC100179977 F6W2K0_CIOIN F6W2K0_CIOIN LOC100182917 LOC100182917 LOC100182748 LOC100182748 F6ZYR4_CIOIN F6ZYR4_CIOIN LOC100181185 LOC100181185 F6R472_CIOIN F6R472_CIOIN F6QXW9_CIOIN F6QXW9_CIOIN F6PPH5_CIOIN F6PPH5_CIOIN LOC100175748 LOC100175748 LOC100182936 LOC100182936 LOC100187303 LOC100187303 F7ADN1_CIOIN F7ADN1_CIOIN F6WUJ1_CIOIN F6WUJ1_CIOIN F7A4T6_CIOIN F7A4T6_CIOIN F6Z1B1_CIOIN F6Z1B1_CIOIN F6YGM0_CIOIN F6YGM0_CIOIN LOC100175600 LOC100175600 F7B4T0_CIOIN F7B4T0_CIOIN LOC100180409 LOC100180409 LOC100176174 LOC100176174 LOC100184172 LOC100184172 F6RMU1_CIOIN F6RMU1_CIOIN F6PMK8_CIOIN F6PMK8_CIOIN F7AQS5_CIOIN F7AQS5_CIOIN LOC100176899 LOC100176899 F6WMB2_CIOIN F6WMB2_CIOIN F6SK60_CIOIN F6SK60_CIOIN LOC100176070 LOC100176070 F6VVB7_CIOIN F6VVB7_CIOIN F6UGC2_CIOIN F6UGC2_CIOIN F6T2X1_CIOIN F6T2X1_CIOIN F6SED5_CIOIN F6SED5_CIOIN LOC100176076 LOC100176076 zf(c2h2)-28 zf(c2h2)-28 F6QSH0_CIOIN F6QSH0_CIOIN LOC100186210 LOC100186210 F6PQY2_CIOIN F6PQY2_CIOIN LOC100180144 LOC100180144 LOC100184104 LOC100184104 LOC100186388 LOC100186388 LOC100182501 LOC100182501 LOC100187186 LOC100187186 F6WHM9_CIOIN F6WHM9_CIOIN LOC100180438 LOC100180438 LOC100181475 LOC100181475 Ci-htf-1 Ci-htf-1 LOC100183428 LOC100183428 F6PKV2_CIOIN F6PKV2_CIOIN F6PKT6_CIOIN F6PKT6_CIOIN F6RC10_CIOIN F6RC10_CIOIN F6R213_CIOIN F6R213_CIOIN LOC100176733 LOC100176733 F7BHD6_CIOIN F7BHD6_CIOIN F6WWY7_CIOIN F6WWY7_CIOIN LOC100180099 LOC100180099 LOC100180168 LOC100180168 LOC100186469 LOC100186469 LOC100182488 LOC100182488 F6QAC7_CIOIN F6QAC7_CIOIN F7BB99_CIOIN F7BB99_CIOIN F6UAB2_CIOIN F6UAB2_CIOIN LOC100175291 LOC100175291 LOC100178975 LOC100178975 F6X972_CIOIN F6X972_CIOIN F6VA91_CIOIN F6VA91_CIOIN F6UIJ8_CIOIN F6UIJ8_CIOIN F6UII6_CIOIN F6UII6_CIOIN F6UIH8_CIOIN F6UIH8_CIOIN LOC100182525 LOC100182525 LOC100185848 LOC100185848 LOC100185658 LOC100185658 LOC100187475 LOC100187475 F6XCT9_CIOIN F6XCT9_CIOIN F6YY15_CIOIN F6YY15_CIOIN F6ZFT6_CIOIN F6ZFT6_CIOIN F7B169_CIOIN F7B169_CIOIN F7B162_CIOIN F7B162_CIOIN F6PWP3_CIOIN F6PWP3_CIOIN F6TDQ4_CIOIN F6TDQ4_CIOIN F6ZXH6_CIOIN F6ZXH6_CIOIN F6UYY4_CIOIN F6UYY4_CIOIN F6SWF0_CIOIN F6SWF0_CIOIN F6SVB2_CIOIN F6SVB2_CIOIN F6XA18_CIOIN F6XA18_CIOIN LOC100180555 LOC100180555 F6VW31_CIOIN F6VW31_CIOIN F6X4R3_CIOIN F6X4R3_CIOIN F6VHE0_CIOIN F6VHE0_CIOIN F6TRT4_CIOIN F6TRT4_CIOIN F6T1T3_CIOIN F6T1T3_CIOIN LOC100185572 LOC100185572 F6ZEU6_CIOIN F6ZEU6_CIOIN H2XJN2_CIOIN H2XJN2_CIOIN H2XJN3_CIOIN H2XJN3_CIOIN LOC100181474 LOC100181474 LOC100186131 LOC100186131 H2XM05_CIOIN H2XM05_CIOIN LOC104265505 LOC104265505 H2XN42_CIOIN H2XN42_CIOIN LOC113475729 LOC113475729 LOC100187279 LOC100187279 H2XR26_CIOIN H2XR26_CIOIN H2XR40_CIOIN H2XR40_CIOIN H2XR98_CIOIN H2XR98_CIOIN LOC104265697 LOC104265697 H2XRK6_CIOIN H2XRK6_CIOIN H2XRN4_CIOIN H2XRN4_CIOIN H2XRV7_CIOIN H2XRV7_CIOIN H2XS59_CIOIN H2XS59_CIOIN H2XSB0_CIOIN H2XSB0_CIOIN H2XSQ8_CIOIN H2XSQ8_CIOIN H2XT98_CIOIN H2XT98_CIOIN LOC100181925 LOC100181925 H2XU69_CIOIN H2XU69_CIOIN H2XU95_CIOIN H2XU95_CIOIN LOC100185988 LOC100185988 LOC100184078 LOC100184078 LOC100182647 LOC100182647 H2XUY6_CIOIN H2XUY6_CIOIN H2XV86_CIOIN H2XV86_CIOIN LOC100182480 LOC100182480 LOC100180565 LOC100180565 LOC100184449 LOC100184449 H2XWF9_CIOIN H2XWF9_CIOIN H2XWH9_CIOIN H2XWH9_CIOIN H2XWI8_CIOIN H2XWI8_CIOIN LOC100180720 LOC100180720 H2XWV3_CIOIN H2XWV3_CIOIN H2XY62_CIOIN H2XY62_CIOIN H2XYN9_CIOIN H2XYN9_CIOIN H2XZD3_CIOIN H2XZD3_CIOIN H2XZJ6_CIOIN H2XZJ6_CIOIN H2Y0F9_CIOIN H2Y0F9_CIOIN H2Y1Y7_CIOIN H2Y1Y7_CIOIN LOC100175056 LOC100175056 H2Y2T2_CIOIN H2Y2T2_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F7A0P0_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)
LOC100180482Structural maintenance of chromosomes protein. (1202 aa)
F6ZGA4_CIOINUncharacterized protein. (135 aa)
F6RJ65_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
F7BAC4_CIOINUncharacterized protein. (387 aa)
foxj2Transcription factor protein isoform X1. (560 aa)
F6YKR1_CIOINDNA_MISMATCH_REPAIR_2 domain-containing protein. (788 aa)
F6VD75_CIOINUncharacterized protein. (553 aa)
F6WSQ4_CIOINTOG domain-containing protein. (201 aa)
F6W6K9_CIOINUncharacterized protein. (1344 aa)
LOC100179977Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (324 aa)
F6W2K0_CIOINDUF1767 domain-containing protein. (486 aa)
LOC100182917Uncharacterized protein. (127 aa)
LOC100182748DNA_mis_repair domain-containing protein. (751 aa)
F6ZYR4_CIOINNipped-B protein. (723 aa)
LOC100181185Protein BCCIP homolog; Belongs to the BCP1 family. (266 aa)
F6R472_CIOINCULLIN_2 domain-containing protein; Belongs to the cullin family. (707 aa)
F6QXW9_CIOINHelicase ATP-binding domain-containing protein. (273 aa)
F6PPH5_CIOINCS domain-containing protein. (243 aa)
LOC100175748SCD domain-containing protein. (980 aa)
LOC100182936RING finger protein 212B-like isoform X1. (310 aa)
LOC100187303Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (824 aa)
F7ADN1_CIOINStructural maintenance of chromosomes protein. (1253 aa)
F6WUJ1_CIOINStructural maintenance of chromosomes protein. (1175 aa)
F7A4T6_CIOINRNB domain-containing protein. (741 aa)
F6Z1B1_CIOINUncharacterized protein. (276 aa)
F6YGM0_CIOINUncharacterized protein. (229 aa)
LOC100175600Coiled-coil domain-containing protein 61 isoform X1. (516 aa)
F7B4T0_CIOINNUDE_C domain-containing protein. (329 aa)
LOC100180409Meiotic recombination protein SPO11. (385 aa)
LOC100176174Uncharacterized protein. (221 aa)
LOC100184172Uncharacterized protein. (391 aa)
F6RMU1_CIOINImportin N-terminal domain-containing protein. (883 aa)
F6PMK8_CIOINUncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (710 aa)
F7AQS5_CIOINPeptidase C50 domain-containing protein. (234 aa)
LOC100176899Protein kinase domain-containing protein. (658 aa)
F6WMB2_CIOINUncharacterized protein. (524 aa)
F6SK60_CIOINUncharacterized protein. (372 aa)
LOC100176070Mitotic spindle assembly checkpoint protein MAD1. (714 aa)
F6VVB7_CIOINCyclin N-terminal domain-containing protein; Belongs to the cyclin family. (315 aa)
F6UGC2_CIOINCnd1 domain-containing protein. (1182 aa)
F6T2X1_CIOINUncharacterized protein; Belongs to the WD repeat SEC13 family. (367 aa)
F6SED5_CIOINUncharacterized protein. (211 aa)
LOC100176076Uncharacterized protein LOC100176076. (657 aa)
zf(c2h2)-28Zinc finger protein isoform X1. (327 aa)
F6QSH0_CIOINUncharacterized protein. (709 aa)
LOC100186210Nucleoporin NDC1. (646 aa)
F6PQY2_CIOINUncharacterized protein. (251 aa)
LOC100180144Vacuolar protein sorting-associated protein 4B-like; Belongs to the AAA ATPase family. (438 aa)
LOC100184104PCI domain-containing protein. (376 aa)
LOC100186388WD repeat-containing protein WRAP73. (449 aa)
LOC100182501TPR_REGION domain-containing protein. (560 aa)
LOC100187186Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (205 aa)
F6WHM9_CIOINUncharacterized protein. (338 aa)
LOC100180438Polymerase delta-interacting protein 2-like. (376 aa)
LOC100181475GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (300 aa)
Ci-htf-1DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1297 aa)
LOC100183428Uncharacterized protein. (786 aa)
F6PKV2_CIOINUBIQUITIN_CONJUGAT_2 domain-containing protein. (144 aa)
F6PKT6_CIOINRNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (822 aa)
F6RC10_CIOINUncharacterized protein. (496 aa)
F6R213_CIOINUncharacterized protein. (1264 aa)
LOC100176733Cnd3 domain-containing protein. (957 aa)
F7BHD6_CIOINFHA domain-containing protein. (474 aa)
F6WWY7_CIOINKIND domain-containing protein. (615 aa)
LOC100180099Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (214 aa)
LOC100180168Protein LSM14 homolog A-B isoform X1. (518 aa)
LOC100186469WD_REPEATS_REGION domain-containing protein. (338 aa)
LOC100182488E3 ubiquitin-protein ligase CCNB1IP1-like isoform X1. (285 aa)
F6QAC7_CIOINASH domain-containing protein. (437 aa)
F7BB99_CIOINMUTSd domain-containing protein. (247 aa)
F6UAB2_CIOINFANCM-MHF_bd domain-containing protein. (274 aa)
LOC100175291Uncharacterized protein LOC100175291. (180 aa)
LOC100178975Charged multivesicular body protein 2a-like. (222 aa)
F6X972_CIOINUncharacterized protein. (144 aa)
F6VA91_CIOINUncharacterized protein. (126 aa)
F6UIJ8_CIOINTudor domain-containing protein. (241 aa)
F6UII6_CIOINHelicase C-terminal domain-containing protein. (205 aa)
F6UIH8_CIOINTudor domain-containing protein. (240 aa)
LOC100182525Uncharacterized protein. (461 aa)
LOC100185848Deacetylase sirtuin-type domain-containing protein. (357 aa)
LOC100185658Kinetochore protein NDC80 homolog. (596 aa)
LOC100187475Peroxisomal membrane protein 11C. (220 aa)
F6XCT9_CIOINKinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (256 aa)
F6YY15_CIOINERCC4 domain-containing protein. (826 aa)
F6ZFT6_CIOINUncharacterized protein. (454 aa)
F7B169_CIOINMutL_C domain-containing protein. (252 aa)
F7B162_CIOINUncharacterized protein. (208 aa)
F6PWP3_CIOINCondensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. (1233 aa)
F6TDQ4_CIOINUbiquitin-like domain-containing protein. (251 aa)
F6ZXH6_CIOINUncharacterized protein. (1068 aa)
F6UYY4_CIOININCENP_ARK-bind domain-containing protein. (142 aa)
F6SWF0_CIOINUncharacterized protein. (181 aa)
F6SVB2_CIOINAcetyltransf_13 domain-containing protein. (196 aa)
F6XA18_CIOINPWWP domain-containing protein. (177 aa)
LOC100180555Uncharacterized protein. (242 aa)
F6VW31_CIOINUncharacterized protein. (333 aa)
F6X4R3_CIOINCENP-T_C domain-containing protein. (177 aa)
F6VHE0_CIOINUncharacterized protein. (753 aa)
F6TRT4_CIOINSYCP2_ARLD domain-containing protein. (384 aa)
F6T1T3_CIOINUncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (310 aa)
LOC100185572Charged multivesicular body protein 4b-like isoform X1. (217 aa)
F6ZEU6_CIOINUncharacterized protein. (601 aa)
H2XJN2_CIOINRECA_2 domain-containing protein. (255 aa)
H2XJN3_CIOINN-acetyltransferase domain-containing protein. (163 aa)
LOC100181474Epimerase family protein SDR39U1 isoform X1. (297 aa)
LOC100186131Nucleolar and spindle-associated protein 1-like isoform X1. (474 aa)
H2XM05_CIOINRho-GAP domain-containing protein. (90 aa)
LOC104265505Uncharacterized protein. (202 aa)
H2XN42_CIOINUncharacterized protein. (362 aa)
LOC113475729Uncharacterized protein. (272 aa)
LOC100187279Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (451 aa)
H2XR26_CIOINUncharacterized protein. (102 aa)
H2XR40_CIOINRING-type domain-containing protein. (355 aa)
H2XR98_CIOINProtein kinase domain-containing protein. (365 aa)
LOC104265697Chromosome transmission fidelity protein 8 homolog. (111 aa)
H2XRK6_CIOINHORMA domain-containing protein. (87 aa)
H2XRN4_CIOINTOG domain-containing protein. (1583 aa)
H2XRV7_CIOINHORMA domain-containing protein. (306 aa)
H2XS59_CIOINCnd1_N domain-containing protein. (231 aa)
H2XSB0_CIOINUncharacterized protein. (578 aa)
H2XSQ8_CIOINUncharacterized protein. (152 aa)
H2XT98_CIOINRECA_2 domain-containing protein. (265 aa)
LOC100181925DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (328 aa)
H2XU69_CIOINUncharacterized protein. (1220 aa)
H2XU95_CIOINUncharacterized protein. (237 aa)
LOC100185988Homologous-pairing protein 2 homolog. (210 aa)
LOC100184078CDT1 domain-containing protein. (407 aa)
LOC100182647Barrier-to-autointegration factor. (90 aa)
H2XUY6_CIOINCullin_Nedd8 domain-containing protein; Belongs to the cullin family. (145 aa)
H2XV86_CIOINDNA_MISMATCH_REPAIR_2 domain-containing protein. (290 aa)
LOC100182480Mitochondrial fission process protein 1. (169 aa)
LOC100180565Peroxisomal membrane protein 11A-like. (219 aa)
LOC100184449PIN2/TERF1-interacting telomerase inhibitor 1-like. (260 aa)
H2XWF9_CIOINUncharacterized protein. (488 aa)
H2XWH9_CIOINProtein kinase domain-containing protein. (203 aa)
H2XWI8_CIOINTPR_REGION domain-containing protein. (298 aa)
LOC100180720GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. (276 aa)
H2XWV3_CIOINRod_C domain-containing protein. (792 aa)
H2XY62_CIOINAAA domain-containing protein; Belongs to the AAA ATPase family. (424 aa)
H2XYN9_CIOINUncharacterized protein. (255 aa)
H2XZD3_CIOINUncharacterized protein. (221 aa)
H2XZJ6_CIOINUncharacterized protein. (400 aa)
H2Y0F9_CIOINUncharacterized protein. (82 aa)
H2Y1Y7_CIOINANK_REP_REGION domain-containing protein. (424 aa)
LOC100175056WASH complex subunit 5 isoform X2. (1163 aa)
H2Y2T2_CIOINFAT domain-containing protein. (235 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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