(15 nodes) Beta-tubulin binding network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100181478	T-complex protein 1 subunit epsilon-like. (538 aa)
	LOC100176974	Uncharacterized protein. (588 aa)
	F6WUJ1_CIOIN	Structural maintenance of chromosomes protein. (1175 aa)
	LOC100180448	Peroxisomal membrane protein PEX14-like isoform X1. (325 aa)
	F6TP68_CIOIN	Uncharacterized protein. (1251 aa)
	F6UWK1_CIOIN	TFCD_C domain-containing protein. (1191 aa)
	AXP83.9	Axonemal 84 kDa protein; Belongs to the CASC1 family. (735 aa)
	F6V3W8_CIOIN	Uncharacterized protein. (264 aa)
	Htt	Uncharacterized protein. (639 aa)
	LOC100177695	Uncharacterized protein. (236 aa)
	H2XY78_CIOIN	Uncharacterized protein. (207 aa)
	H2Y204_CIOIN	Uncharacterized protein. (246 aa)
	LOC100180570	Uncharacterized protein. (552 aa)
	F6WBK6_CIOIN	TPR_REGION domain-containing protein. (446 aa)
	LOC100179830	Protein UXT-like. (145 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6WBK6_CIOIN	LOC100176974	ENSCINP00000019082	ENSCINP00000018086	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.590
H2XY78_CIOIN	H2Y204_CIOIN	ENSCINP00000034612	ENSCINP00000035939	Uncharacterized protein.	Uncharacterized protein.	0.529
H2XY78_CIOIN	Htt	ENSCINP00000034612	ENSCINP00000027572	Uncharacterized protein.	Uncharacterized protein.	0.657
H2Y204_CIOIN	H2XY78_CIOIN	ENSCINP00000035939	ENSCINP00000034612	Uncharacterized protein.	Uncharacterized protein.	0.529
H2Y204_CIOIN	Htt	ENSCINP00000035939	ENSCINP00000027572	Uncharacterized protein.	Uncharacterized protein.	0.931
Htt	H2XY78_CIOIN	ENSCINP00000027572	ENSCINP00000034612	Uncharacterized protein.	Uncharacterized protein.	0.657
Htt	H2Y204_CIOIN	ENSCINP00000027572	ENSCINP00000035939	Uncharacterized protein.	Uncharacterized protein.	0.931
LOC100176974	F6WBK6_CIOIN	ENSCINP00000018086	ENSCINP00000019082	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.590