(19 nodes) Presynaptic active zone network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XS27_CIOIN	Uncharacterized protein. (75 aa)
	H2Y2K0_CIOIN	Uncharacterized protein. (399 aa)
	H2XX14_CIOIN	Uncharacterized protein. (116 aa)
	H2XRZ3_CIOIN	t-SNARE coiled-coil homology domain-containing protein. (76 aa)
	H2XQJ7_CIOIN	Uncharacterized protein. (573 aa)
	F7AIB9_CIOIN	Uncharacterized protein. (271 aa)
	F6YU56_CIOIN	Uncharacterized protein. (351 aa)
	F6YUZ1_CIOIN	Uncharacterized protein. (695 aa)
	Zf(c2h2)-101	C2H2-type domain-containing protein. (212 aa)
	LOC100184556	Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (442 aa)
	F6U959_CIOIN	Uncharacterized protein. (948 aa)
	F6ZGD0_CIOIN	SAM domain-containing protein. (261 aa)
	F6SDZ0_CIOIN	Uncharacterized protein. (787 aa)
	F6YCG7_CIOIN	Adenylate cyclase type 6; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1086 aa)
	LOC100176945	Protein unc-13 homolog B-like. (1518 aa)
	F6QNB6_CIOIN	Uncharacterized protein. (157 aa)
	F6Y321_CIOIN	t-SNARE coiled-coil homology domain-containing protein. (236 aa)
	F6ZZL8_CIOIN	Uncharacterized protein. (1200 aa)
	vgat	Aa_trans domain-containing protein. (637 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SDZ0_CIOIN	F6U959_CIOIN	ENSCINP00000000757	ENSCINP00000021734	Uncharacterized protein.	Uncharacterized protein.	0.746
F6SDZ0_CIOIN	F6ZZL8_CIOIN	ENSCINP00000000757	ENSCINP00000012503	Uncharacterized protein.	Uncharacterized protein.	0.779
F6SDZ0_CIOIN	LOC100176945	ENSCINP00000000757	ENSCINP00000004445	Uncharacterized protein.	Protein unc-13 homolog B-like.	0.566
F6U959_CIOIN	F6SDZ0_CIOIN	ENSCINP00000021734	ENSCINP00000000757	Uncharacterized protein.	Uncharacterized protein.	0.746
F6U959_CIOIN	F6Y321_CIOIN	ENSCINP00000021734	ENSCINP00000011472	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.650
F6U959_CIOIN	F6ZZL8_CIOIN	ENSCINP00000021734	ENSCINP00000012503	Uncharacterized protein.	Uncharacterized protein.	0.862
F6U959_CIOIN	H2XRZ3_CIOIN	ENSCINP00000021734	ENSCINP00000032427	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.650
F6U959_CIOIN	LOC100176945	ENSCINP00000021734	ENSCINP00000004445	Uncharacterized protein.	Protein unc-13 homolog B-like.	0.958
F6U959_CIOIN	vgat	ENSCINP00000021734	ENSCINP00000017689	Uncharacterized protein.	Aa_trans domain-containing protein.	0.650
F6Y321_CIOIN	F6U959_CIOIN	ENSCINP00000011472	ENSCINP00000021734	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.650
F6Y321_CIOIN	F6ZZL8_CIOIN	ENSCINP00000011472	ENSCINP00000012503	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.506
F6Y321_CIOIN	LOC100176945	ENSCINP00000011472	ENSCINP00000004445	t-SNARE coiled-coil homology domain-containing protein.	Protein unc-13 homolog B-like.	0.719
F6Y321_CIOIN	vgat	ENSCINP00000011472	ENSCINP00000017689	t-SNARE coiled-coil homology domain-containing protein.	Aa_trans domain-containing protein.	0.477
F6YU56_CIOIN	H2XX14_CIOIN	ENSCINP00000026122	ENSCINP00000034198	Uncharacterized protein.	Uncharacterized protein.	0.798
F6YUZ1_CIOIN	F6ZZL8_CIOIN	ENSCINP00000026101	ENSCINP00000012503	Uncharacterized protein.	Uncharacterized protein.	0.543
F6ZZL8_CIOIN	F6SDZ0_CIOIN	ENSCINP00000012503	ENSCINP00000000757	Uncharacterized protein.	Uncharacterized protein.	0.779
F6ZZL8_CIOIN	F6U959_CIOIN	ENSCINP00000012503	ENSCINP00000021734	Uncharacterized protein.	Uncharacterized protein.	0.862
F6ZZL8_CIOIN	F6Y321_CIOIN	ENSCINP00000012503	ENSCINP00000011472	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.506
F6ZZL8_CIOIN	F6YUZ1_CIOIN	ENSCINP00000012503	ENSCINP00000026101	Uncharacterized protein.	Uncharacterized protein.	0.543
F6ZZL8_CIOIN	H2XQJ7_CIOIN	ENSCINP00000012503	ENSCINP00000031931	Uncharacterized protein.	Uncharacterized protein.	0.919