(3 nodes) propionate-CoA ligase activity network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7B0S6_CIOIN	Acetyl-coenzyme A synthetase. (667 aa)
	H2XYB0_CIOIN	Uncharacterized protein. (664 aa)
	H2XYN5_CIOIN	Acetyl-coenzyme A synthetase. (633 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F7B0S6_CIOIN	H2XYB0_CIOIN	ENSCINP00000017977	ENSCINP00000034644	Acetyl-coenzyme A synthetase.	Uncharacterized protein.	0.910
F7B0S6_CIOIN	H2XYN5_CIOIN	ENSCINP00000017977	ENSCINP00000034769	Acetyl-coenzyme A synthetase.	Acetyl-coenzyme A synthetase.	0.903
H2XYB0_CIOIN	F7B0S6_CIOIN	ENSCINP00000034644	ENSCINP00000017977	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.910
H2XYB0_CIOIN	H2XYN5_CIOIN	ENSCINP00000034644	ENSCINP00000034769	Uncharacterized protein.	Acetyl-coenzyme A synthetase.	0.909
H2XYN5_CIOIN	F7B0S6_CIOIN	ENSCINP00000034769	ENSCINP00000017977	Acetyl-coenzyme A synthetase.	Acetyl-coenzyme A synthetase.	0.903
H2XYN5_CIOIN	H2XYB0_CIOIN	ENSCINP00000034769	ENSCINP00000034644	Acetyl-coenzyme A synthetase.	Uncharacterized protein.	0.909