STRINGSTRING
Tgfbeta2 Tgfbeta2 LOC100183377 LOC100183377 Ipf1 Ipf1 LOC100177697 LOC100177697 F6UJF1_CIOIN F6UJF1_CIOIN F7APX0_CIOIN F7APX0_CIOIN F6TLB6_CIOIN F6TLB6_CIOIN sfrp2 sfrp2 F6YC82_CIOIN F6YC82_CIOIN F6RS66_CIOIN F6RS66_CIOIN ciatpsyna ciatpsyna F6RR11_CIOIN F6RR11_CIOIN F6UMA7_CIOIN F6UMA7_CIOIN F6X0V6_CIOIN F6X0V6_CIOIN Ci-Net Ci-Net LOC100184954 LOC100184954 LOC100176974 LOC100176974 ppar ppar F7B221_CIOIN F7B221_CIOIN F6XLS2_CIOIN F6XLS2_CIOIN F6W3W9_CIOIN F6W3W9_CIOIN F6T2G1_CIOIN F6T2G1_CIOIN LOC100178517 LOC100178517 H2XNY4_CIOIN H2XNY4_CIOIN LOC100185578 LOC100185578 H2XUU5_CIOIN H2XUU5_CIOIN LOC100183150 LOC100183150 H2Y0R6_CIOIN H2Y0R6_CIOIN H2Y2G5_CIOIN H2Y2G5_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tgfbeta2TGF_BETA_2 domain-containing protein. (435 aa)
LOC100183377Vasohibin-1-like isoform X2. (319 aa)
Ipf1Homeobox domain-containing protein. (411 aa)
LOC100177697Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (236 aa)
F6UJF1_CIOINUDENN FLCN/SMCR8-type domain-containing protein. (561 aa)
F7APX0_CIOINUncharacterized protein. (1090 aa)
F6TLB6_CIOINUncharacterized protein. (891 aa)
sfrp2Secreted frizzled-related protein isoform X1. (293 aa)
F6YC82_CIOINSARAH domain-containing protein. (138 aa)
F6RS66_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (462 aa)
ciatpsynaATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (554 aa)
F6RR11_CIOINATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (422 aa)
F6UMA7_CIOINPID domain-containing protein. (458 aa)
F6X0V6_CIOINUncharacterized protein. (426 aa)
Ci-NetTranscription factor protein. (205 aa)
LOC100184954Uncharacterized protein. (760 aa)
LOC100176974Uncharacterized protein. (588 aa)
pparNuclear receptor. (644 aa)
F7B221_CIOINLIM domain-containing protein. (326 aa)
F6XLS2_CIOINUncharacterized protein. (745 aa)
F6W3W9_CIOINUncharacterized protein. (758 aa)
F6T2G1_CIOINUncharacterized protein. (298 aa)
LOC100178517Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (142 aa)
H2XNY4_CIOINEAF domain-containing protein. (241 aa)
LOC100185578Aminoacyl tRNA synthase complex-interacting multifunctional protein 1. (297 aa)
H2XUU5_CIOINUncharacterized protein. (532 aa)
LOC100183150WD repeat-containing protein 13-like. (463 aa)
H2Y0R6_CIOINMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (227 aa)
H2Y2G5_CIOINMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (160 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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