(29 nodes) Positive regulation of synaptic transmission network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6UYT5_CIOIN	AC_N domain-containing protein. (314 aa)
	LOC100187429	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (160 aa)
	F6X1D6_CIOIN	RWD domain-containing protein. (156 aa)
	ENSCINP00000030178	annotation not available (90 aa)
	H2XRP4_CIOIN	Uncharacterized protein. (126 aa)
	H2XRZ3_CIOIN	t-SNARE coiled-coil homology domain-containing protein. (76 aa)
	H2XS27_CIOIN	Uncharacterized protein. (75 aa)
	H2XT32_CIOIN	Uncharacterized protein. (127 aa)
	LOC100175581	Uncharacterized protein LOC100175581. (186 aa)
	H2Y004_CIOIN	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (232 aa)
	H2Y0V6_CIOIN	Uncharacterized protein. (204 aa)
	H2Y1U3_CIOIN	Protein kinase domain-containing protein. (1156 aa)
	H2Y300_CIOIN	Ion_trans domain-containing protein. (131 aa)
	F6ZGD0_CIOIN	SAM domain-containing protein. (261 aa)
	F6YCG7_CIOIN	Adenylate cyclase type 6; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1086 aa)
	F7AZQ8_CIOIN	Uncharacterized protein. (720 aa)
	F6W9U8_CIOIN	PB1 domain-containing protein. (224 aa)
	F6TBE2_CIOIN	Uncharacterized protein. (444 aa)
	zf(c2h2)-130	Zinc finger protein 130. (1089 aa)
	F6Y321_CIOIN	t-SNARE coiled-coil homology domain-containing protein. (236 aa)
	LOC100181289	Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	F6SUC9_CIOIN	Uncharacterized protein. (1841 aa)
	F6QB43_CIOIN	Uncharacterized protein. (224 aa)
	F7BHB8_CIOIN	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (257 aa)
	F6U959_CIOIN	Uncharacterized protein. (948 aa)
	Zf(ring)-35	RING-type domain-containing protein. (462 aa)
	LOC100184598	Sequestosome-1 isoform X1. (329 aa)
	F6YW14_CIOIN	Uncharacterized protein. (170 aa)
	F6PQS1_CIOIN	Protein kinase domain-containing protein. (190 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QB43_CIOIN	H2Y300_CIOIN	ENSCINP00000018120	ENSCINP00000036285	Uncharacterized protein.	Ion_trans domain-containing protein.	0.515
F6U959_CIOIN	F6Y321_CIOIN	ENSCINP00000021734	ENSCINP00000011472	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.650
F6U959_CIOIN	H2XRZ3_CIOIN	ENSCINP00000021734	ENSCINP00000032427	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.650
F6U959_CIOIN	LOC100187429	ENSCINP00000021734	ENSCINP00000027629	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.767
F6W9U8_CIOIN	LOC100184598	ENSCINP00000002565	ENSCINP00000023991	PB1 domain-containing protein.	Sequestosome-1 isoform X1.	0.909
F6X1D6_CIOIN	H2Y1U3_CIOIN	ENSCINP00000029439	ENSCINP00000035877	RWD domain-containing protein.	Protein kinase domain-containing protein.	0.899
F6Y321_CIOIN	F6U959_CIOIN	ENSCINP00000011472	ENSCINP00000021734	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.650
F6Y321_CIOIN	LOC100187429	ENSCINP00000011472	ENSCINP00000027629	t-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.969
H2XRP4_CIOIN	H2XT32_CIOIN	ENSCINP00000032328	ENSCINP00000032816	Uncharacterized protein.	Uncharacterized protein.	0.535
H2XRZ3_CIOIN	F6U959_CIOIN	ENSCINP00000032427	ENSCINP00000021734	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.650
H2XRZ3_CIOIN	LOC100187429	ENSCINP00000032427	ENSCINP00000027629	t-SNARE coiled-coil homology domain-containing protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.936
H2XT32_CIOIN	H2XRP4_CIOIN	ENSCINP00000032816	ENSCINP00000032328	Uncharacterized protein.	Uncharacterized protein.	0.535
H2XT32_CIOIN	H2Y0V6_CIOIN	ENSCINP00000032816	ENSCINP00000035540	Uncharacterized protein.	Uncharacterized protein.	0.528
H2Y0V6_CIOIN	H2XT32_CIOIN	ENSCINP00000035540	ENSCINP00000032816	Uncharacterized protein.	Uncharacterized protein.	0.528
H2Y1U3_CIOIN	F6X1D6_CIOIN	ENSCINP00000035877	ENSCINP00000029439	Protein kinase domain-containing protein.	RWD domain-containing protein.	0.899
H2Y300_CIOIN	F6QB43_CIOIN	ENSCINP00000036285	ENSCINP00000018120	Ion_trans domain-containing protein.	Uncharacterized protein.	0.515
LOC100184598	F6W9U8_CIOIN	ENSCINP00000023991	ENSCINP00000002565	Sequestosome-1 isoform X1.	PB1 domain-containing protein.	0.909
LOC100187429	F6U959_CIOIN	ENSCINP00000027629	ENSCINP00000021734	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.767
LOC100187429	F6Y321_CIOIN	ENSCINP00000027629	ENSCINP00000011472	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	t-SNARE coiled-coil homology domain-containing protein.	0.969
LOC100187429	H2XRZ3_CIOIN	ENSCINP00000027629	ENSCINP00000032427	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	t-SNARE coiled-coil homology domain-containing protein.	0.936