(32 nodes) Neuromuscular process network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100176674	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (278 aa)
	LOC100185478	Troponin C, skeletal muscle. (164 aa)
	LOC100184422	Biogenesis of lysosome-related organelles complex 1 subunit 4-like. (175 aa)
	LOC100175958	Uncharacterized protein. (815 aa)
	F6YAC3_CIOIN	Senescence domain-containing protein. (116 aa)
	F6SZF9_CIOIN	Phorbol-ester/DAG-type domain-containing protein. (219 aa)
	F7BJQ5_CIOIN	ANK_REP_REGION domain-containing protein. (133 aa)
	F6XZ04_CIOIN	Uncharacterized protein. (171 aa)
	F6Z6E4_CIOIN	V-SNARE domain-containing protein. (176 aa)
	H2XL89_CIOIN	PHR domain-containing protein. (208 aa)
	H2XM17_CIOIN	FAT domain-containing protein. (187 aa)
	H2XMJ2_CIOIN	Uncharacterized protein. (195 aa)
	LOC100179388	Uncharacterized protein. (225 aa)
	H2XWT8_CIOIN	Uncharacterized protein. (206 aa)
	H2XXN7_CIOIN	Uncharacterized protein. (721 aa)
	H2XY58_CIOIN	PHR domain-containing protein. (416 aa)
	LOC100180100	Uncharacterized protein. (204 aa)
	H2Y004_CIOIN	PBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (232 aa)
	H2Y066_CIOIN	Uncharacterized protein. (361 aa)
	ENSCINP00000035646	annotation not available (78 aa)
	H2Y1K9_CIOIN	Uncharacterized protein. (674 aa)
	LOC100183893	Uncharacterized protein. (480 aa)
	F6YSA0_CIOIN	Uncharacterized protein. (165 aa)
	F6VK85_CIOIN	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
	F6Z7A4_CIOIN	DUF4472 domain-containing protein. (550 aa)
	F6Z4V3_CIOIN	Tyrosine-protein kinase. (440 aa)
	F6U9S1_CIOIN	RING-type domain-containing protein. (911 aa)
	LOC100187142	Beta-hexosaminidase. (535 aa)
	LOC100178428	Beta-hexosaminidase. (538 aa)
	F7B4P8_CIOIN	GTP_cyclohydroI domain-containing protein. (215 aa)
	pou-iv	POU domain protein. (412 aa)
	F7B690_CIOIN	CAP-Gly domain-containing protein. (1092 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCINP00000035646	LOC100176674	ENSCINP00000035646	ENSCINP00000012053	annotation not available	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	0.408
F6SZF9_CIOIN	F6Z4V3_CIOIN	ENSCINP00000014300	ENSCINP00000006691	Phorbol-ester/DAG-type domain-containing protein.	Tyrosine-protein kinase.	0.575
F6U9S1_CIOIN	H2XY58_CIOIN	ENSCINP00000007159	ENSCINP00000034592	RING-type domain-containing protein.	PHR domain-containing protein.	0.943
F6VK85_CIOIN	H2XM17_CIOIN	ENSCINP00000002868	ENSCINP00000030699	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.943
F6VK85_CIOIN	H2XWT8_CIOIN	ENSCINP00000002868	ENSCINP00000034122	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.925
F6VK85_CIOIN	H2Y066_CIOIN	ENSCINP00000002868	ENSCINP00000035300	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.929
F6XZ04_CIOIN	LOC100179388	ENSCINP00000027042	ENSCINP00000033086	Uncharacterized protein.	Uncharacterized protein.	0.891
F6XZ04_CIOIN	LOC100185478	ENSCINP00000027042	ENSCINP00000012854	Uncharacterized protein.	Troponin C, skeletal muscle.	0.571
F6YSA0_CIOIN	LOC100179388	ENSCINP00000002771	ENSCINP00000033086	Uncharacterized protein.	Uncharacterized protein.	0.927
F6YSA0_CIOIN	LOC100185478	ENSCINP00000002771	ENSCINP00000012854	Uncharacterized protein.	Troponin C, skeletal muscle.	0.781
F6Z4V3_CIOIN	F6SZF9_CIOIN	ENSCINP00000006691	ENSCINP00000014300	Tyrosine-protein kinase.	Phorbol-ester/DAG-type domain-containing protein.	0.575
F6Z6E4_CIOIN	LOC100175958	ENSCINP00000028512	ENSCINP00000013509	V-SNARE domain-containing protein.	Uncharacterized protein.	0.676
F7B4P8_CIOIN	LOC100176674	ENSCINP00000008998	ENSCINP00000012053	GTP_cyclohydroI domain-containing protein.	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.	0.408
H2XL89_CIOIN	H2XY58_CIOIN	ENSCINP00000030421	ENSCINP00000034592	PHR domain-containing protein.	PHR domain-containing protein.	0.528
H2XM17_CIOIN	F6VK85_CIOIN	ENSCINP00000030699	ENSCINP00000002868	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.943
H2XM17_CIOIN	H2XWT8_CIOIN	ENSCINP00000030699	ENSCINP00000034122	FAT domain-containing protein.	Uncharacterized protein.	0.920
H2XM17_CIOIN	H2Y066_CIOIN	ENSCINP00000030699	ENSCINP00000035300	FAT domain-containing protein.	Uncharacterized protein.	0.964
H2XWT8_CIOIN	F6VK85_CIOIN	ENSCINP00000034122	ENSCINP00000002868	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.925
H2XWT8_CIOIN	H2XM17_CIOIN	ENSCINP00000034122	ENSCINP00000030699	Uncharacterized protein.	FAT domain-containing protein.	0.920
H2XWT8_CIOIN	H2Y066_CIOIN	ENSCINP00000034122	ENSCINP00000035300	Uncharacterized protein.	Uncharacterized protein.	0.949