STRINGSTRING
LOC100177853 LOC100177853 snail snail F6QH43_CIOIN F6QH43_CIOIN F6UK82_CIOIN F6UK82_CIOIN F6SLD6_CIOIN F6SLD6_CIOIN F6VHE0_CIOIN F6VHE0_CIOIN H2XZE5_CIOIN H2XZE5_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100177853Dickkopf-related protein 3. (394 aa)
snailUncharacterized protein. (584 aa)
F6QH43_CIOINRING-type domain-containing protein. (309 aa)
F6UK82_CIOINUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (544 aa)
F6SLD6_CIOINDeacetylase sirtuin-type domain-containing protein. (737 aa)
F6VHE0_CIOINUncharacterized protein. (753 aa)
H2XZE5_CIOINWD_REPEATS_REGION domain-containing protein. (395 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (20%) [HD]