STRINGSTRING
F6UT21_CIOIN F6UT21_CIOIN F6PKR4_CIOIN F6PKR4_CIOIN LOC100185077 LOC100185077 F6VK85_CIOIN F6VK85_CIOIN LOC100186815 LOC100186815 Smoothened Smoothened Sir2-d Sir2-d tmod tmod F6TQ49_CIOIN F6TQ49_CIOIN F6UKS5_CIOIN F6UKS5_CIOIN F6WUP8_CIOIN F6WUP8_CIOIN LOC100182129 LOC100182129 F6VRV5_CIOIN F6VRV5_CIOIN Klf2 Klf2 nox4 nox4 mef2 mef2 F6ZS78_CIOIN F6ZS78_CIOIN LOC494358 LOC494358 H2XM17_CIOIN H2XM17_CIOIN Bmp2/4 Bmp2/4 srf srf H2XSQ5_CIOIN H2XSQ5_CIOIN H2XSV3_CIOIN H2XSV3_CIOIN H2XUB7_CIOIN H2XUB7_CIOIN atg5 atg5 H2XWT8_CIOIN H2XWT8_CIOIN H2XZE3_CIOIN H2XZE3_CIOIN LOC100176948 LOC100176948 H2Y066_CIOIN H2Y066_CIOIN Mapkk4 Mapkk4 LOC100179624 LOC100179624 Sepn1 Sepn1 LOC100176674 LOC100176674 LOC100187265 LOC100187265
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6UT21_CIOINWD_REPEATS_REGION domain-containing protein. (260 aa)
F6PKR4_CIOINIg-like domain-containing protein. (101 aa)
LOC100185077BAR domain-containing protein. (194 aa)
F6VK85_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
LOC100186815Insulin-like growth factor-binding protein 5. (225 aa)
SmoothenedUncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (441 aa)
Sir2-dDeacetylase sirtuin-type domain-containing protein. (91 aa)
tmodTropomodulin. (366 aa)
F6TQ49_CIOINANK_REP_REGION domain-containing protein. (147 aa)
F6UKS5_CIOINUncharacterized protein; Belongs to the DOCK family. (1360 aa)
F6WUP8_CIOINDHR-2 domain-containing protein; Belongs to the DOCK family. (408 aa)
LOC100182129Uncharacterized protein LOC100182129. (355 aa)
F6VRV5_CIOINUncharacterized protein. (179 aa)
Klf2Uncharacterized protein. (610 aa)
nox4FAD-binding FR-type domain-containing protein. (811 aa)
mef2MADS-box domain-containing protein. (439 aa)
F6ZS78_CIOINUncharacterized protein. (245 aa)
LOC494358Uncharacterized protein. (1243 aa)
H2XM17_CIOINFAT domain-containing protein. (187 aa)
Bmp2/4TGFb_propeptide domain-containing protein. (376 aa)
srfTranscription factor protein. (335 aa)
H2XSQ5_CIOINUncharacterized protein. (939 aa)
H2XSV3_CIOINSortilin-Vps10 domain-containing protein. (276 aa)
H2XUB7_CIOINSortilin-Vps10 domain-containing protein. (205 aa)
atg5Autophagy protein 5; Involved in autophagic vesicle formation. (268 aa)
H2XWT8_CIOINUncharacterized protein. (206 aa)
H2XZE3_CIOINUncharacterized protein. (2228 aa)
LOC100176948Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1972 aa)
H2Y066_CIOINUncharacterized protein. (361 aa)
Mapkk4Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (475 aa)
LOC100179624Histone-lysine N-methyltransferase SMYD3. (430 aa)
Sepn1EF-hand domain-containing protein. (463 aa)
LOC100176674CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (278 aa)
LOC100187265Uncharacterized protein. (949 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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