STRINGSTRING
LOC100183493 LOC100183493 LOC100180811 LOC100180811 F7B1X4_CIOIN F7B1X4_CIOIN LOC100186269 LOC100186269 LOC100180099 LOC100180099 LOC100186469 LOC100186469 LOC100176335 LOC100176335 F6VVE9_CIOIN F6VVE9_CIOIN H2XRK6_CIOIN H2XRK6_CIOIN F6UNP2_CIOIN F6UNP2_CIOIN F6SQE1_CIOIN F6SQE1_CIOIN F6SQA2_CIOIN F6SQA2_CIOIN F6SQ79_CIOIN F6SQ79_CIOIN F6PMK8_CIOIN F6PMK8_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100183493Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (169 aa)
LOC100180811Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (258 aa)
F7B1X4_CIOINWD_REPEATS_REGION domain-containing protein. (523 aa)
LOC100186269Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (388 aa)
LOC100180099Ubiquitin-conjugating enzyme E2 S; Belongs to the ubiquitin-conjugating enzyme family. (214 aa)
LOC100186469WD_REPEATS_REGION domain-containing protein. (338 aa)
LOC100176335Arrestin domain-containing protein 3-like. (390 aa)
F6VVE9_CIOINUncharacterized protein. (608 aa)
H2XRK6_CIOINHORMA domain-containing protein. (87 aa)
F6UNP2_CIOINWD_REPEATS_REGION domain-containing protein. (464 aa)
F6SQE1_CIOINUncharacterized protein. (651 aa)
F6SQA2_CIOINDTC domain-containing protein. (81 aa)
F6SQ79_CIOINRING-type domain-containing protein. (190 aa)
F6PMK8_CIOINUncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (710 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.