(18 nodes) Regulation of histone H3-K4 methylation network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6YNK9_CIOIN	Uncharacterized protein. (628 aa)
	F6VU73_CIOIN	SET domain-containing protein. (453 aa)
	F6W6Y6_CIOIN	Uncharacterized protein. (451 aa)
	H2XR99_CIOIN	FHA domain-containing protein. (427 aa)
	LOC100182087	WD repeat-containing protein 61-like. (305 aa)
	LOC100178064	KAT8 regulatory NSL complex subunit 3-like. (1087 aa)
	F6SKY6_CIOIN	HDAg domain-containing protein. (537 aa)
	Zf(cxxc)-5	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1257 aa)
	smad4	Mothers against decapentaplegic homolog. (527 aa)
	LOC100181206	TPR_REGION domain-containing protein. (1027 aa)
	F6PX81_CIOIN	Plus3 domain-containing protein. (336 aa)
	LOC100187100	Lysine-specific histone demethylase 1A. (705 aa)
	F7AZZ9_CIOIN	PEHE domain-containing protein. (517 aa)
	H2XT15_CIOIN	PHD-type domain-containing protein. (343 aa)
	LOC100183284	SKIP_SNW domain-containing protein. (534 aa)
	LOC100175816	TPR_REGION domain-containing protein. (1034 aa)
	F6X941_CIOIN	Uncharacterized protein. (296 aa)
	H2XU12_CIOIN	Uncharacterized protein. (189 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PX81_CIOIN	F6SKY6_CIOIN	ENSCINP00000013055	ENSCINP00000010608	Plus3 domain-containing protein.	HDAg domain-containing protein.	0.593
F6PX81_CIOIN	F6X941_CIOIN	ENSCINP00000013055	ENSCINP00000022209	Plus3 domain-containing protein.	Uncharacterized protein.	0.754
F6PX81_CIOIN	H2XU12_CIOIN	ENSCINP00000013055	ENSCINP00000033146	Plus3 domain-containing protein.	Uncharacterized protein.	0.440
F6PX81_CIOIN	LOC100175816	ENSCINP00000013055	ENSCINP00000018251	Plus3 domain-containing protein.	TPR_REGION domain-containing protein.	0.979
F6PX81_CIOIN	LOC100182087	ENSCINP00000013055	ENSCINP00000031610	Plus3 domain-containing protein.	WD repeat-containing protein 61-like.	0.939
F6SKY6_CIOIN	F6PX81_CIOIN	ENSCINP00000010608	ENSCINP00000013055	HDAg domain-containing protein.	Plus3 domain-containing protein.	0.593
F6SKY6_CIOIN	LOC100175816	ENSCINP00000010608	ENSCINP00000018251	HDAg domain-containing protein.	TPR_REGION domain-containing protein.	0.614
F6SKY6_CIOIN	LOC100182087	ENSCINP00000010608	ENSCINP00000031610	HDAg domain-containing protein.	WD repeat-containing protein 61-like.	0.540
F6VU73_CIOIN	F6YNK9_CIOIN	ENSCINP00000024302	ENSCINP00000023413	SET domain-containing protein.	Uncharacterized protein.	0.880
F6VU73_CIOIN	H2XR99_CIOIN	ENSCINP00000024302	ENSCINP00000032183	SET domain-containing protein.	FHA domain-containing protein.	0.930
F6VU73_CIOIN	LOC100178064	ENSCINP00000024302	ENSCINP00000009991	SET domain-containing protein.	KAT8 regulatory NSL complex subunit 3-like.	0.948
F6VU73_CIOIN	LOC100181206	ENSCINP00000024302	ENSCINP00000013052	SET domain-containing protein.	TPR_REGION domain-containing protein.	0.626
F6W6Y6_CIOIN	F6YNK9_CIOIN	ENSCINP00000028024	ENSCINP00000023413	Uncharacterized protein.	Uncharacterized protein.	0.947
F6W6Y6_CIOIN	H2XR99_CIOIN	ENSCINP00000028024	ENSCINP00000032183	Uncharacterized protein.	FHA domain-containing protein.	0.890
F6W6Y6_CIOIN	LOC100178064	ENSCINP00000028024	ENSCINP00000009991	Uncharacterized protein.	KAT8 regulatory NSL complex subunit 3-like.	0.900
F6W6Y6_CIOIN	LOC100181206	ENSCINP00000028024	ENSCINP00000013052	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.495
F6X941_CIOIN	F6PX81_CIOIN	ENSCINP00000022209	ENSCINP00000013055	Uncharacterized protein.	Plus3 domain-containing protein.	0.754
F6X941_CIOIN	H2XU12_CIOIN	ENSCINP00000022209	ENSCINP00000033146	Uncharacterized protein.	Uncharacterized protein.	0.754
F6X941_CIOIN	LOC100182087	ENSCINP00000022209	ENSCINP00000031610	Uncharacterized protein.	WD repeat-containing protein 61-like.	0.932
F6YNK9_CIOIN	F6VU73_CIOIN	ENSCINP00000023413	ENSCINP00000024302	Uncharacterized protein.	SET domain-containing protein.	0.880