(10 nodes) Cardiac muscle cell development network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6TQ49_CIOIN	ANK_REP_REGION domain-containing protein. (147 aa)
	H2XM17_CIOIN	FAT domain-containing protein. (187 aa)
	srf	Transcription factor protein. (335 aa)
	atg5	Autophagy protein 5; Involved in autophagic vesicle formation. (268 aa)
	H2XWT8_CIOIN	Uncharacterized protein. (206 aa)
	H2XZE3_CIOIN	Uncharacterized protein. (2228 aa)
	H2Y066_CIOIN	Uncharacterized protein. (361 aa)
	LOC100176674	CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (278 aa)
	F6VK85_CIOIN	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (754 aa)
	Mapkk4	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (475 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6VK85_CIOIN	H2XM17_CIOIN	ENSCINP00000002868	ENSCINP00000030699	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	FAT domain-containing protein.	0.943
F6VK85_CIOIN	H2XWT8_CIOIN	ENSCINP00000002868	ENSCINP00000034122	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.925
F6VK85_CIOIN	H2Y066_CIOIN	ENSCINP00000002868	ENSCINP00000035300	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.929
H2XM17_CIOIN	F6VK85_CIOIN	ENSCINP00000030699	ENSCINP00000002868	FAT domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.943
H2XM17_CIOIN	H2XWT8_CIOIN	ENSCINP00000030699	ENSCINP00000034122	FAT domain-containing protein.	Uncharacterized protein.	0.920
H2XM17_CIOIN	H2Y066_CIOIN	ENSCINP00000030699	ENSCINP00000035300	FAT domain-containing protein.	Uncharacterized protein.	0.964
H2XWT8_CIOIN	F6VK85_CIOIN	ENSCINP00000034122	ENSCINP00000002868	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.925
H2XWT8_CIOIN	H2XM17_CIOIN	ENSCINP00000034122	ENSCINP00000030699	Uncharacterized protein.	FAT domain-containing protein.	0.920
H2XWT8_CIOIN	H2Y066_CIOIN	ENSCINP00000034122	ENSCINP00000035300	Uncharacterized protein.	Uncharacterized protein.	0.949
H2Y066_CIOIN	F6VK85_CIOIN	ENSCINP00000035300	ENSCINP00000002868	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.929
H2Y066_CIOIN	H2XM17_CIOIN	ENSCINP00000035300	ENSCINP00000030699	Uncharacterized protein.	FAT domain-containing protein.	0.964
H2Y066_CIOIN	H2XWT8_CIOIN	ENSCINP00000035300	ENSCINP00000034122	Uncharacterized protein.	Uncharacterized protein.	0.949