STRINGSTRING
H2XT32_CIOIN H2XT32_CIOIN H2Y0V6_CIOIN H2Y0V6_CIOIN F6ZGD0_CIOIN F6ZGD0_CIOIN zf(c2h2)-130 zf(c2h2)-130 H2Y004_CIOIN H2Y004_CIOIN LOC100187429 LOC100187429 H2XRP4_CIOIN H2XRP4_CIOIN H2XS27_CIOIN H2XS27_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2XT32_CIOINUncharacterized protein. (127 aa)
H2Y0V6_CIOINUncharacterized protein. (204 aa)
F6ZGD0_CIOINSAM domain-containing protein. (261 aa)
zf(c2h2)-130Zinc finger protein 130. (1089 aa)
H2Y004_CIOINPBPe domain-containing protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (232 aa)
LOC100187429Synaptosomal-associated protein; Belongs to the SNAP-25 family. (160 aa)
H2XRP4_CIOINUncharacterized protein. (126 aa)
H2XS27_CIOINUncharacterized protein. (75 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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