STRINGSTRING
F6X3A4_CIOIN F6X3A4_CIOIN F6ZGR3_CIOIN F6ZGR3_CIOIN LOC100176571 LOC100176571 F6QM01_CIOIN F6QM01_CIOIN F6R497_CIOIN F6R497_CIOIN ikk-epsilon ikk-epsilon F6X3C5_CIOIN F6X3C5_CIOIN LOC100180168 LOC100180168 F6V7C2_CIOIN F6V7C2_CIOIN F6YBZ2_CIOIN F6YBZ2_CIOIN F6SYE0_CIOIN F6SYE0_CIOIN H2Y0C1_CIOIN H2Y0C1_CIOIN H2Y0R6_CIOIN H2Y0R6_CIOIN H2Y2G5_CIOIN H2Y2G5_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6X3A4_CIOINUncharacterized protein. (594 aa)
F6ZGR3_CIOINUncharacterized protein. (670 aa)
LOC100176571Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family. (198 aa)
F6QM01_CIOINMacro domain-containing protein. (247 aa)
F6R497_CIOINPoly [ADP-ribose] polymerase. (353 aa)
ikk-epsilonikappaB kinase isoform X1. (797 aa)
F6X3C5_CIOINHA2 domain-containing protein. (413 aa)
LOC100180168Protein LSM14 homolog A-B isoform X1. (518 aa)
F6V7C2_CIOINProtein kinase domain-containing protein. (521 aa)
F6YBZ2_CIOINPoly [ADP-ribose] polymerase. (381 aa)
F6SYE0_CIOINProtein kinase domain-containing protein. (216 aa)
H2Y0C1_CIOINUncharacterized protein. (314 aa)
H2Y0R6_CIOINMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (227 aa)
H2Y2G5_CIOINMediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (160 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (18%) [HD]