STRINGSTRING
LOC100175198 LOC100175198 LOC100176674 LOC100176674 H2Y2V4_CIOIN H2Y2V4_CIOIN F6SYE0_CIOIN F6SYE0_CIOIN F7BEA7_CIOIN F7BEA7_CIOIN F6QD88_CIOIN F6QD88_CIOIN LOC100187236 LOC100187236 F6PIY6_CIOIN F6PIY6_CIOIN F6X3A4_CIOIN F6X3A4_CIOIN F6X3C5_CIOIN F6X3C5_CIOIN F6VXC2_CIOIN F6VXC2_CIOIN hox12 hox12 LOC100176290 LOC100176290 F6TAK3_CIOIN F6TAK3_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100175198Zinc finger CCCH domain-containing protein 10 isoform X2. (672 aa)
LOC100176674CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family. (278 aa)
H2Y2V4_CIOINProtein kinase domain-containing protein. (209 aa)
F6SYE0_CIOINProtein kinase domain-containing protein. (216 aa)
F7BEA7_CIOINUncharacterized protein. (679 aa)
F6QD88_CIOINMaelstrom domain-containing protein. (122 aa)
LOC100187236Uncharacterized protein. (468 aa)
F6PIY6_CIOINGPS2_interact domain-containing protein. (373 aa)
F6X3A4_CIOINUncharacterized protein. (594 aa)
F6X3C5_CIOINHA2 domain-containing protein. (413 aa)
F6VXC2_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (262 aa)
hox12Transcription factor protein. (484 aa)
LOC100176290Uncharacterized protein LOC100176290 isoform X4. (787 aa)
F6TAK3_CIOINPUM-HD domain-containing protein. (782 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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