(21 nodes) Regulation of extent of cell growth network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Your Input:
	LOC100179332	semaphorin-4G-like isoform X3; Belongs to the semaphorin family. (793 aa)
	H2Y1D3_CIOIN	Uncharacterized protein. (132 aa)
	srf	Transcription factor protein. (335 aa)
	H2XQT4_CIOIN	Uncharacterized protein. (321 aa)
	H2XPL3_CIOIN	Uncharacterized protein. (434 aa)
	F6Y6P2_CIOIN	Sema domain-containing protein; Belongs to the semaphorin family. (483 aa)
	F6ZX31_CIOIN	Sema domain-containing protein; Belongs to the semaphorin family. (292 aa)
	F7AFQ9_CIOIN	Uncharacterized protein. (482 aa)
	F7BKY1_CIOIN	Sema domain-containing protein. (229 aa)
	F6VS24_CIOIN	Sema domain-containing protein. (152 aa)
	F6TTH0_CIOIN	Uncharacterized protein. (426 aa)
	wnt3	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (304 aa)
	F6YAC3_CIOIN	Senescence domain-containing protein. (116 aa)
	F7A9X0_CIOIN	Protein kinase domain-containing protein. (772 aa)
	F6ZUG2_CIOIN	Uncharacterized protein. (150 aa)
	LOC100177957	Tyrosine-protein kinase RYK. (593 aa)
	F6ZDN3_CIOIN	Sema domain-containing protein. (427 aa)
	F6YDG1_CIOIN	CULLIN_2 domain-containing protein; Belongs to the cullin family. (586 aa)
	F6SCE7_CIOIN	Uncharacterized protein. (361 aa)
	L7N0S2_CIOIN	Uncharacterized protein. (175 aa)
	LOC100181289	Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SCE7_CIOIN	F6YAC3_CIOIN	ENSCINP00000005933	ENSCINP00000014184	Uncharacterized protein.	Senescence domain-containing protein.	0.839
F6Y6P2_CIOIN	F7BKY1_CIOIN	ENSCINP00000026796	ENSCINP00000024714	Sema domain-containing protein; Belongs to the semaphorin family.	Sema domain-containing protein.	0.423
F6YAC3_CIOIN	F6SCE7_CIOIN	ENSCINP00000014184	ENSCINP00000005933	Senescence domain-containing protein.	Uncharacterized protein.	0.839
F7BKY1_CIOIN	F6Y6P2_CIOIN	ENSCINP00000024714	ENSCINP00000026796	Sema domain-containing protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.423
LOC100177957	wnt3	ENSCINP00000018455	ENSCINP00000023949	Tyrosine-protein kinase RYK.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.753
wnt3	LOC100177957	ENSCINP00000023949	ENSCINP00000018455	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Tyrosine-protein kinase RYK.	0.753