STRINGSTRING
F6ZM08_CIOIN F6ZM08_CIOIN F6UWK1_CIOIN F6UWK1_CIOIN F6TA08_CIOIN F6TA08_CIOIN LOC100176657 LOC100176657 F7BDH1_CIOIN F7BDH1_CIOIN H2XLW5_CIOIN H2XLW5_CIOIN H2XNH4_CIOIN H2XNH4_CIOIN LOC100178355 LOC100178355 srf srf LOC100177737 LOC100177737
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6ZM08_CIOINUncharacterized protein. (782 aa)
F6UWK1_CIOINTFCD_C domain-containing protein. (1191 aa)
F6TA08_CIOINRas-associating domain-containing protein. (247 aa)
LOC100176657Claudin-1. (232 aa)
F7BDH1_CIOINBRO1 domain-containing protein. (902 aa)
H2XLW5_CIOINDilute domain-containing protein. (191 aa)
H2XNH4_CIOINClaudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (215 aa)
LOC100178355ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family. (184 aa)
srfTranscription factor protein. (335 aa)
LOC100177737Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (161 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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