STRINGSTRING
LOC100177596 LOC100177596 F6TN36_CIOIN F6TN36_CIOIN LOC100175728 LOC100175728 LOC101242392 LOC101242392 F6PPC0_CIOIN F6PPC0_CIOIN LOC100175820 LOC100175820 F6XTZ0_CIOIN F6XTZ0_CIOIN LOC100184340 LOC100184340 F7B867_CIOIN F7B867_CIOIN F6R8V3_CIOIN F6R8V3_CIOIN LOC100183816 LOC100183816 F6RWU5_CIOIN F6RWU5_CIOIN F7B7F7_CIOIN F7B7F7_CIOIN F7AVY6_CIOIN F7AVY6_CIOIN F6U602_CIOIN F6U602_CIOIN F7BBT3_CIOIN F7BBT3_CIOIN F7A983_CIOIN F7A983_CIOIN LOC100175053 LOC100175053 LOC101243211 LOC101243211 LOC100187398 LOC100187398 LOC100176513 LOC100176513 F6ZAE1_CIOIN F6ZAE1_CIOIN F6SVM4_CIOIN F6SVM4_CIOIN F6RZE8_CIOIN F6RZE8_CIOIN F6X7X8_CIOIN F6X7X8_CIOIN F6ZIF2_CIOIN F6ZIF2_CIOIN F6ZID9_CIOIN F6ZID9_CIOIN LOC100179012 LOC100179012 LOC100187540 LOC100187540 LOC100178236 LOC100178236 LOC100176223 LOC100176223 F6SID0_CIOIN F6SID0_CIOIN F6V6D5_CIOIN F6V6D5_CIOIN F6V6F4_CIOIN F6V6F4_CIOIN LOC100187164 LOC100187164 LOC100184121 LOC100184121 F6WYJ4_CIOIN F6WYJ4_CIOIN F6R3K6_CIOIN F6R3K6_CIOIN F6QDH2_CIOIN F6QDH2_CIOIN F6Z411_CIOIN F6Z411_CIOIN F6XKZ0_CIOIN F6XKZ0_CIOIN F6XKY1_CIOIN F6XKY1_CIOIN F6XKX5_CIOIN F6XKX5_CIOIN F6WWT1_CIOIN F6WWT1_CIOIN F6QXN6_CIOIN F6QXN6_CIOIN LOC100185410 LOC100185410 F6TX56_CIOIN F6TX56_CIOIN LOC100184797 LOC100184797 F7BEQ8_CIOIN F7BEQ8_CIOIN LOC100176941 LOC100176941 F6V7G7_CIOIN F6V7G7_CIOIN LOC100178387 LOC100178387 F7BI62_CIOIN F7BI62_CIOIN LOC100182417 LOC100182417 LOC100187159 LOC100187159 LOC100176514 LOC100176514 H2XPE7_CIOIN H2XPE7_CIOIN LOC100180055 LOC100180055 H2XSS0_CIOIN H2XSS0_CIOIN H2XSX9_CIOIN H2XSX9_CIOIN LOC100181775 LOC100181775 LOC100182124 LOC100182124 H2Y0N1_CIOIN H2Y0N1_CIOIN H2Y0Q6_CIOIN H2Y0Q6_CIOIN LOC100176234 LOC100176234 H2Y2U3_CIOIN H2Y2U3_CIOIN F7B4V3_CIOIN F7B4V3_CIOIN LOC100182348 LOC100182348 F6SLQ4_CIOIN F6SLQ4_CIOIN F6TIK7_CIOIN F6TIK7_CIOIN F6TIU3_CIOIN F6TIU3_CIOIN LOC100181450 LOC100181450 LOC100182767 LOC100182767 F6Y886_CIOIN F6Y886_CIOIN F7BH80_CIOIN F7BH80_CIOIN F6SPK3_CIOIN F6SPK3_CIOIN LOC100181765 LOC100181765 F6Q6F0_CIOIN F6Q6F0_CIOIN F6YFY0_CIOIN F6YFY0_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100177596Eukaryotic initiation factor 4A-I; Belongs to the DEAD box helicase family. (430 aa)
F6TN36_CIOINMIF4G domain-containing protein. (228 aa)
LOC100175728Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner. (583 aa)
LOC101242392Eukaryotic translation initiation factor 4E type 2; Belongs to the eukaryotic initiation factor 4E family. (219 aa)
F6PPC0_CIOINUncharacterized protein. (414 aa)
LOC100175820Eukaryotic peptide chain release factor subunit 1. (434 aa)
F6XTZ0_CIOINRRM domain-containing protein. (405 aa)
LOC100184340Probable RNA-binding protein EIF1AD. (167 aa)
F7B867_CIOINRRM domain-containing protein. (133 aa)
F6R8V3_CIOINEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (1051 aa)
LOC100183816Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (306 aa)
F6RWU5_CIOINMIF4G domain-containing protein. (689 aa)
F7B7F7_CIOINUncharacterized protein. (427 aa)
F7AVY6_CIOINUncharacterized protein. (705 aa)
F6U602_CIOINW2 domain-containing protein. (426 aa)
F7BBT3_CIOINTr-type G domain-containing protein. (711 aa)
F7A983_CIOINUncharacterized protein. (187 aa)
LOC100175053Uncharacterized protein LOC100175053. (189 aa)
LOC101243211Translation initiation factor eIF-2B subunit alpha; Belongs to the eIF-2B alpha/beta/delta subunits family. (305 aa)
LOC100187398Eukaryotic translation initiation factor 1A, X-chromosomal; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. (188 aa)
LOC100176513Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (489 aa)
F6ZAE1_CIOINRRM domain-containing protein. (249 aa)
F6SVM4_CIOINEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (221 aa)
F6RZE8_CIOINRRM domain-containing protein. (329 aa)
F6X7X8_CIOINTr-type G domain-containing protein. (554 aa)
F6ZIF2_CIOINElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (464 aa)
F6ZID9_CIOINElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (469 aa)
LOC100179012Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (328 aa)
LOC100187540Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (235 aa)
LOC100178236Eukaryotic translation initiation factor 2D-like. (612 aa)
LOC100176223Tr-type G domain-containing protein. (549 aa)
F6SID0_CIOINEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (443 aa)
F6V6D5_CIOINNTP_transferase domain-containing protein. (267 aa)
F6V6F4_CIOINW2 domain-containing protein. (563 aa)
LOC100187164Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. (478 aa)
LOC100184121Eukaryotic translation elongation factor 1 epsilon-1-like. (144 aa)
F6WYJ4_CIOINTr-type G domain-containing protein. (117 aa)
F6R3K6_CIOINUncharacterized protein. (1037 aa)
F6QDH2_CIOINGST C-terminal domain-containing protein. (239 aa)
F6Z411_CIOINUncharacterized protein. (426 aa)
F6XKZ0_CIOINEFG_C domain-containing protein. (162 aa)
F6XKY1_CIOINTr-type G domain-containing protein. (836 aa)
F6XKX5_CIOINGTP_EFTU_D2 domain-containing protein. (333 aa)
F6WWT1_CIOINeIF2B_5 domain-containing protein. (267 aa)
F6QXN6_CIOINRRM domain-containing protein. (369 aa)
LOC100185410MPN domain-containing protein. (204 aa)
F6TX56_CIOINTr-type G domain-containing protein. (428 aa)
LOC100184797Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (768 aa)
F7BEQ8_CIOINMIF4G domain-containing protein. (212 aa)
LOC100176941Elongation factor 1-beta-like; Belongs to the EF-1-beta/EF-1-delta family. (225 aa)
F6V7G7_CIOINSUI1 domain-containing protein. (109 aa)
LOC100178387Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
F7BI62_CIOINNTP_transferase domain-containing protein. (453 aa)
LOC100182417Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (498 aa)
LOC100187159Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (356 aa)
LOC100176514peptidyl-tRNA hydrolase ICT1, mitochondrial. (201 aa)
H2XPE7_CIOINUncharacterized protein. (122 aa)
LOC100180055Uncharacterized protein LOC100180055. (140 aa)
H2XSS0_CIOINeIF-5a domain-containing protein. (99 aa)
H2XSX9_CIOINElongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (460 aa)
LOC100181775Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (467 aa)
LOC100182124Density-regulated protein-like. (192 aa)
H2Y0N1_CIOINUncharacterized protein. (179 aa)
H2Y0Q6_CIOINEukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA. (272 aa)
LOC100176234Tr-type G domain-containing protein. (590 aa)
H2Y2U3_CIOINEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (240 aa)
F7B4V3_CIOINUncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (225 aa)
LOC100182348elongin-A3 member D isoform X2. (622 aa)
F6SLQ4_CIOINUncharacterized protein. (257 aa)
F6TIK7_CIOINUncharacterized protein. (480 aa)
F6TIU3_CIOINEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (326 aa)
LOC100181450Eukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. In the eIF-3 complex, eif3d specifically recognizes and binds the 7- methylguanosine cap of a subset of mRNAs. (554 aa)
LOC100182767Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family. (700 aa)
F6Y886_CIOINUncharacterized protein. (423 aa)
F7BH80_CIOINUncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family. (482 aa)
F6SPK3_CIOINTr-type G domain-containing protein. (576 aa)
LOC100181765Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (371 aa)
F6Q6F0_CIOINEF-1_beta_acid domain-containing protein. (187 aa)
F6YFY0_CIOINTr-type G domain-containing protein. (473 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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