STRINGSTRING
LOC100176070 LOC100176070 F6THB4_CIOIN F6THB4_CIOIN LOC100182716 LOC100182716 F6PNC3_CIOIN F6PNC3_CIOIN H2XRK6_CIOIN H2XRK6_CIOIN LOC100185658 LOC100185658 F6WB99_CIOIN F6WB99_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100176070Mitotic spindle assembly checkpoint protein MAD1. (714 aa)
F6THB4_CIOINUncharacterized protein. (181 aa)
LOC100182716Flap endonuclease GEN homolog 1. (709 aa)
F6PNC3_CIOINUncharacterized protein. (1086 aa)
H2XRK6_CIOINHORMA domain-containing protein. (87 aa)
LOC100185658Kinetochore protein NDC80 homolog. (596 aa)
F6WB99_CIOINUncharacterized protein. (401 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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