(52 nodes) Vesicle tethering complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC113474008	Trafficking protein particle complex subunit 2-like. (140 aa)
	F6SFZ3_CIOIN	Nbas_N domain-containing protein. (337 aa)
	LOC100185122	Uncharacterized protein. (863 aa)
	LOC100177880	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
	F6Q8U3_CIOIN	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (927 aa)
	LOC100183827	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (656 aa)
	LOC100181148	Syntaxin-17-like. (363 aa)
	LOC100176467	Vacuolar protein sorting-associated protein 52 homolog. (694 aa)
	LOC100186853	Trafficking protein particle complex subunit 13. (389 aa)
	ENSCINP00000009254	Uncharacterized protein. (173 aa)
	F6RBT7_CIOIN	Vps53_N domain-containing protein. (842 aa)
	F6R924_CIOIN	Uncharacterized protein. (361 aa)
	F6R906_CIOIN	Uncharacterized protein. (400 aa)
	F6R901_CIOIN	Uncharacterized protein. (835 aa)
	F6TUU8_CIOIN	Uncharacterized protein. (671 aa)
	F6ZSI1_CIOIN	V-SNARE coiled-coil homology domain-containing protein. (188 aa)
	F7BBV8_CIOIN	CNH domain-containing protein. (856 aa)
	F6PRZ9_CIOIN	Vps8 domain-containing protein. (1238 aa)
	F6Q2U2_CIOIN	CNH domain-containing protein. (871 aa)
	LOC100175958	Uncharacterized protein. (815 aa)
	F6SZ37_CIOIN	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (844 aa)
	F6WWH2_CIOIN	PH domain-containing protein. (715 aa)
	LOC100180059	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (626 aa)
	LOC100179545	Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (185 aa)
	F7B4B2_CIOIN	Uncharacterized protein. (470 aa)
	LOC494428	Uncharacterized protein. (712 aa)
	F6T120_CIOIN	TPR_REGION domain-containing protein. (357 aa)
	LOC100183428	Uncharacterized protein. (786 aa)
	F6WWX5_CIOIN	Exocyst complex component 7; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (731 aa)
	LOC100185334	Conserved oligomeric Golgi complex subunit 7. (765 aa)
	F6UNA9_CIOIN	Sec3_C domain-containing protein. (314 aa)
	F6UMZ6_CIOIN	Uncharacterized protein. (360 aa)
	F6YU56_CIOIN	Uncharacterized protein. (351 aa)
	F6VMI7_CIOIN	Uncharacterized protein. (262 aa)
	zf(ring)-20	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (841 aa)
	H2XLC7_CIOIN	Cog4 domain-containing protein. (703 aa)
	LOC100183093	Trafficking protein particle complex subunit 6B-like. (157 aa)
	LOC100186755	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (598 aa)
	H2XQ02_CIOIN	Uncharacterized protein. (288 aa)
	H2XRQ5_CIOIN	Uncharacterized protein. (357 aa)
	H2XRU0_CIOIN	Sec8_exocyst domain-containing protein. (843 aa)
	H2XTL8_CIOIN	Uncharacterized protein. (335 aa)
	H2XUI1_CIOIN	Uncharacterized protein. (122 aa)
	H2XUV6_CIOIN	Uncharacterized protein. (725 aa)
	H2XWN1_CIOIN	Uncharacterized protein. (113 aa)
	LOC100185024	Spermatogenesis-defective protein 39 homolog. (499 aa)
	H2XX14_CIOIN	Uncharacterized protein. (116 aa)
	H2XYV9_CIOIN	Uncharacterized protein. (444 aa)
	H2XZ96_CIOIN	RING-type domain-containing protein. (277 aa)
	H2Y1J4_CIOIN	Uncharacterized protein. (135 aa)
	H2Y1L9_CIOIN	Uncharacterized protein. (902 aa)
	H2Y2A0_CIOIN	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (214 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCINP00000009254	F6R901_CIOIN	ENSCINP00000009254	ENSCINP00000009990	Uncharacterized protein.	Uncharacterized protein.	0.461
ENSCINP00000009254	F6SFZ3_CIOIN	ENSCINP00000009254	ENSCINP00000000468	Uncharacterized protein.	Nbas_N domain-containing protein.	0.895
ENSCINP00000009254	H2XQ02_CIOIN	ENSCINP00000009254	ENSCINP00000031736	Uncharacterized protein.	Uncharacterized protein.	0.895
ENSCINP00000009254	H2XYV9_CIOIN	ENSCINP00000009254	ENSCINP00000034843	Uncharacterized protein.	Uncharacterized protein.	0.952
ENSCINP00000009254	H2Y1L9_CIOIN	ENSCINP00000009254	ENSCINP00000035803	Uncharacterized protein.	Uncharacterized protein.	0.400
ENSCINP00000009254	LOC100183428	ENSCINP00000009254	ENSCINP00000018123	Uncharacterized protein.	Uncharacterized protein.	0.936
ENSCINP00000009254	LOC100183827	ENSCINP00000009254	ENSCINP00000006510	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.415
F6PRZ9_CIOIN	F6Q2U2_CIOIN	ENSCINP00000013070	ENSCINP00000013314	Vps8 domain-containing protein.	CNH domain-containing protein.	0.887
F6PRZ9_CIOIN	F6SZ37_CIOIN	ENSCINP00000013070	ENSCINP00000014316	Vps8 domain-containing protein.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.995
F6PRZ9_CIOIN	F6YU56_CIOIN	ENSCINP00000013070	ENSCINP00000026122	Vps8 domain-containing protein.	Uncharacterized protein.	0.937
F6PRZ9_CIOIN	F7BBV8_CIOIN	ENSCINP00000013070	ENSCINP00000011601	Vps8 domain-containing protein.	CNH domain-containing protein.	0.909
F6PRZ9_CIOIN	H2XX14_CIOIN	ENSCINP00000013070	ENSCINP00000034198	Vps8 domain-containing protein.	Uncharacterized protein.	0.937
F6PRZ9_CIOIN	LOC100180059	ENSCINP00000013070	ENSCINP00000014583	Vps8 domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.867
F6PRZ9_CIOIN	LOC100185122	ENSCINP00000013070	ENSCINP00000000564	Vps8 domain-containing protein.	Uncharacterized protein.	0.995
F6PRZ9_CIOIN	LOC100186755	ENSCINP00000013070	ENSCINP00000030562	Vps8 domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.868
F6PRZ9_CIOIN	zf(ring)-20	ENSCINP00000013070	ENSCINP00000026604	Vps8 domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.856
F6Q2U2_CIOIN	F6PRZ9_CIOIN	ENSCINP00000013314	ENSCINP00000013070	CNH domain-containing protein.	Vps8 domain-containing protein.	0.887
F6Q2U2_CIOIN	F6SZ37_CIOIN	ENSCINP00000013314	ENSCINP00000014316	CNH domain-containing protein.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.995
F6Q2U2_CIOIN	F6YU56_CIOIN	ENSCINP00000013314	ENSCINP00000026122	CNH domain-containing protein.	Uncharacterized protein.	0.914
F6Q2U2_CIOIN	F7BBV8_CIOIN	ENSCINP00000013314	ENSCINP00000011601	CNH domain-containing protein.	CNH domain-containing protein.	0.947