(16 nodes) Negative regulation of protein localization to nucleus network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC100182595	Ras-related protein Rab-23. (243 aa)
	Sir2-d	Deacetylase sirtuin-type domain-containing protein. (91 aa)
	F6UJF1_CIOIN	UDENN FLCN/SMCR8-type domain-containing protein. (561 aa)
	LOC100181877	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (307 aa)
	F6TLB6_CIOIN	Uncharacterized protein. (891 aa)
	F6Z0T1_CIOIN	Uncharacterized protein. (418 aa)
	F6SIN5_CIOIN	RNA_pol_Rpb1_5 domain-containing protein. (749 aa)
	F7ABN7_CIOIN	F-box domain-containing protein. (241 aa)
	F6PMJ3_CIOIN	Uncharacterized protein. (219 aa)
	F6W3W9_CIOIN	Uncharacterized protein. (758 aa)
	F6T2G1_CIOIN	Uncharacterized protein. (298 aa)
	LOC100178688	Uncharacterized protein LOC100178688. (632 aa)
	LOC100179235	N_BRCA1_IG domain-containing protein. (241 aa)
	H2XZ57_CIOIN	Uncharacterized protein. (229 aa)
	H2Y0J7_CIOIN	RPOLA_N domain-containing protein. (225 aa)
	LOC100178190	Calcineurin B homologous protein 1-like. (189 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6SIN5_CIOIN	H2Y0J7_CIOIN	ENSCINP00000015772	ENSCINP00000035431	RNA_pol_Rpb1_5 domain-containing protein.	RPOLA_N domain-containing protein.	0.900
F6T2G1_CIOIN	F6TLB6_CIOIN	ENSCINP00000029547	ENSCINP00000007196	Uncharacterized protein.	Uncharacterized protein.	0.950
F6T2G1_CIOIN	F6W3W9_CIOIN	ENSCINP00000029547	ENSCINP00000028344	Uncharacterized protein.	Uncharacterized protein.	0.946
F6TLB6_CIOIN	F6T2G1_CIOIN	ENSCINP00000007196	ENSCINP00000029547	Uncharacterized protein.	Uncharacterized protein.	0.950
F6TLB6_CIOIN	F6W3W9_CIOIN	ENSCINP00000007196	ENSCINP00000028344	Uncharacterized protein.	Uncharacterized protein.	0.949
F6W3W9_CIOIN	F6T2G1_CIOIN	ENSCINP00000028344	ENSCINP00000029547	Uncharacterized protein.	Uncharacterized protein.	0.946
F6W3W9_CIOIN	F6TLB6_CIOIN	ENSCINP00000028344	ENSCINP00000007196	Uncharacterized protein.	Uncharacterized protein.	0.949
H2Y0J7_CIOIN	F6SIN5_CIOIN	ENSCINP00000035431	ENSCINP00000015772	RPOLA_N domain-containing protein.	RNA_pol_Rpb1_5 domain-containing protein.	0.900