STRINGSTRING
H2XRL5_CIOIN H2XRL5_CIOIN LOC100182896 LOC100182896 H2Y306_CIOIN H2Y306_CIOIN LOC108950147 LOC108950147 LOC100176589 LOC100176589 F6RKM9_CIOIN F6RKM9_CIOIN F6Y1Y0_CIOIN F6Y1Y0_CIOIN F6UIT3_CIOIN F6UIT3_CIOIN F6RZM2_CIOIN F6RZM2_CIOIN F6W6L5_CIOIN F6W6L5_CIOIN F6W685_CIOIN F6W685_CIOIN F6T368_CIOIN F6T368_CIOIN cdc45 cdc45
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
H2XRL5_CIOINzf-DNA_Pol domain-containing protein. (143 aa)
LOC100182896DNA replication complex GINS protein PSF1. (195 aa)
H2Y306_CIOINSld5 domain-containing protein. (206 aa)
LOC108950147DNA helicase; Belongs to the MCM family. (798 aa)
LOC100176589DNA helicase; Belongs to the MCM family. (785 aa)
F6RKM9_CIOINDNA helicase; Belongs to the MCM family. (820 aa)
F6Y1Y0_CIOINUncharacterized protein. (217 aa)
F6UIT3_CIOINUncharacterized protein. (162 aa)
F6RZM2_CIOINDNA polymerase. (382 aa)
F6W6L5_CIOINMCM domain-containing protein; Belongs to the MCM family. (422 aa)
F6W685_CIOINUncharacterized protein. (428 aa)
F6T368_CIOINDNA_pol_B_exo1 domain-containing protein. (276 aa)
cdc45Uncharacterized protein. (249 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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