STRINGSTRING
F6Z8G0_CIOIN F6Z8G0_CIOIN LOC100176488 LOC100176488 LOC100181478 LOC100181478 F7BEK1_CIOIN F7BEK1_CIOIN F7ABN7_CIOIN F7ABN7_CIOIN F6TE72_CIOIN F6TE72_CIOIN nox4 nox4 F6VBZ6_CIOIN F6VBZ6_CIOIN F6WHH4_CIOIN F6WHH4_CIOIN F6X0L7_CIOIN F6X0L7_CIOIN H2XN24_CIOIN H2XN24_CIOIN H2XNN7_CIOIN H2XNN7_CIOIN H2XP61_CIOIN H2XP61_CIOIN H2XPE3_CIOIN H2XPE3_CIOIN LOC100178035 LOC100178035 H2XR98_CIOIN H2XR98_CIOIN H2XRB3_CIOIN H2XRB3_CIOIN LOC104265697 LOC104265697 H2XU97_CIOIN H2XU97_CIOIN LOC100184449 LOC100184449 H2XWR8_CIOIN H2XWR8_CIOIN H2XXJ7_CIOIN H2XXJ7_CIOIN H2XYT6_CIOIN H2XYT6_CIOIN LOC100179093 LOC100179093 H2Y2T2_CIOIN H2Y2T2_CIOIN H2Y306_CIOIN H2Y306_CIOIN LOC100184859 LOC100184859 LOC100184129 LOC100184129 F6V7V1_CIOIN F6V7V1_CIOIN F6WQ08_CIOIN F6WQ08_CIOIN LOC100181635 LOC100181635 LOC100181431 LOC100181431 myc myc LOC100181422 LOC100181422 F6R982_CIOIN F6R982_CIOIN F6U2M6_CIOIN F6U2M6_CIOIN zf(c2h2)-102 zf(c2h2)-102 F6TV58_CIOIN F6TV58_CIOIN F6Y8C3_CIOIN F6Y8C3_CIOIN F6PPP3_CIOIN F6PPP3_CIOIN Mapkk7 Mapkk7 PIF1 PIF1 F7AK99_CIOIN F7AK99_CIOIN F6R4R6_CIOIN F6R4R6_CIOIN LOC100181285 LOC100181285 F6W7K5_CIOIN F6W7K5_CIOIN LOC104265605 LOC104265605 F6RJ65_CIOIN F6RJ65_CIOIN F6SFA7_CIOIN F6SFA7_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6Z8G0_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (454 aa)
LOC100176488T-complex protein 1 subunit delta. (540 aa)
LOC100181478T-complex protein 1 subunit epsilon-like. (538 aa)
F7BEK1_CIOINDNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (219 aa)
F7ABN7_CIOINF-box domain-containing protein. (241 aa)
F6TE72_CIOINProtein kinase domain-containing protein. (172 aa)
nox4FAD-binding FR-type domain-containing protein. (811 aa)
F6VBZ6_CIOINTelo_bind domain-containing protein. (527 aa)
F6WHH4_CIOINBRCT domain-containing protein. (198 aa)
F6X0L7_CIOINFHA_2 domain-containing protein. (571 aa)
H2XN24_CIOINPI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (158 aa)
H2XNN7_CIOINUncharacterized protein. (112 aa)
H2XP61_CIOINH/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (236 aa)
H2XPE3_CIOINDNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (185 aa)
LOC100178035Sulfhydryl oxidase. (156 aa)
H2XR98_CIOINProtein kinase domain-containing protein. (365 aa)
H2XRB3_CIOINUncharacterized protein. (548 aa)
LOC104265697Chromosome transmission fidelity protein 8 homolog. (111 aa)
H2XU97_CIOINHRDC domain-containing protein. (194 aa)
LOC100184449PIN2/TERF1-interacting telomerase inhibitor 1-like. (260 aa)
H2XWR8_CIOINNudix hydrolase domain-containing protein. (235 aa)
H2XXJ7_CIOINUncharacterized protein. (347 aa)
H2XYT6_CIOIN3'-5' exonuclease domain-containing protein. (261 aa)
LOC100179093AAA domain-containing protein. (329 aa)
H2Y2T2_CIOINFAT domain-containing protein. (235 aa)
H2Y306_CIOINSld5 domain-containing protein. (206 aa)
LOC100184859Replication factor C subunit 3-like. (355 aa)
LOC100184129Inhibitor of growth protein. (240 aa)
F6V7V1_CIOINUncharacterized protein. (513 aa)
F6WQ08_CIOINProtein kinase domain-containing protein. (473 aa)
LOC100181635AAA domain-containing protein. (356 aa)
LOC100181431Uncharacterized protein. (535 aa)
mycTranscription factor protein isoform X1. (681 aa)
LOC100181422Replication factor C subunit 2-like. (336 aa)
F6R982_CIOINWD_REPEATS_REGION domain-containing protein. (433 aa)
F6U2M6_CIOINPUA domain-containing protein. (528 aa)
zf(c2h2)-102ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase. (706 aa)
F6TV58_CIOINUncharacterized protein. (147 aa)
F6Y8C3_CIOINRNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (956 aa)
F6PPP3_CIOINAAA domain-containing protein. (738 aa)
Mapkk7Protein kinase domain-containing protein. (478 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. (607 aa)
F7AK99_CIOINUncharacterized protein; Belongs to the AAA ATPase family. (696 aa)
F6R4R6_CIOINHRDC domain-containing protein. (292 aa)
LOC100181285T-complex protein 1 subunit gamma. (543 aa)
F6W7K5_CIOINT-complex protein 1 subunit gamma. (530 aa)
LOC104265605Uncharacterized protein. (575 aa)
F6RJ65_CIOINUncharacterized protein; Belongs to the PI3/PI4-kinase family. (268 aa)
F6SFA7_CIOINUncharacterized protein. (230 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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