STRINGSTRING
LOC100185122 LOC100185122 ci-arfgap-3 ci-arfgap-3 LOC100181289 LOC100181289 LOC100186863 LOC100186863 F6ZLD5_CIOIN F6ZLD5_CIOIN F6UYT5_CIOIN F6UYT5_CIOIN H2XWH4_CIOIN H2XWH4_CIOIN H2XXT9_CIOIN H2XXT9_CIOIN LOC100176356 LOC100176356 Rap1b Rap1b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC100185122Uncharacterized protein. (863 aa)
ci-arfgap-3Zinc finger protein Ci-ArfGAP-3. (760 aa)
LOC100181289Cyclin-dependent-like kinase 5; Belongs to the protein kinase superfamily. (292 aa)
LOC100186863PDZ domain-containing protein GIPC1. (316 aa)
F6ZLD5_CIOINProtein kinase domain-containing protein. (164 aa)
F6UYT5_CIOINAC_N domain-containing protein. (314 aa)
H2XWH4_CIOINLLGL domain-containing protein. (101 aa)
H2XXT9_CIOINUncharacterized protein. (276 aa)
LOC100176356SNARE-associated protein Snapin-like. (133 aa)
Rap1bUncharacterized protein. (184 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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