(12 nodes) Negative regulation of double-strand break repair network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	F6VQG0_CIOIN	Uncharacterized protein. (160 aa)
	H2XLP4_CIOIN	Uncharacterized protein. (455 aa)
	H2XPT0_CIOIN	Uncharacterized protein. (114 aa)
	H2XXZ3_CIOIN	Uncharacterized protein. (870 aa)
	F6YT81_CIOIN	Uncharacterized protein. (157 aa)
	F6TL19_CIOIN	ENDO3c domain-containing protein. (364 aa)
	F6XHT6_CIOIN	UvrD-like helicase C-terminal domain-containing protein. (212 aa)
	F6W7J0_CIOIN	Uncharacterized protein. (224 aa)
	F7AHP3_CIOIN	Uncharacterized protein. (2812 aa)
	F7AWL5_CIOIN	F-box domain-containing protein. (431 aa)
	F6WRI9_CIOIN	HECT domain-containing protein. (533 aa)
	F6U8W0_CIOIN	OTU domain-containing protein. (204 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6TL19_CIOIN	F6XHT6_CIOIN	ENSCINP00000021491	ENSCINP00000019609	ENDO3c domain-containing protein.	UvrD-like helicase C-terminal domain-containing protein.	0.402
F6TL19_CIOIN	F7AWL5_CIOIN	ENSCINP00000021491	ENSCINP00000023021	ENDO3c domain-containing protein.	F-box domain-containing protein.	0.402
F6U8W0_CIOIN	F6WRI9_CIOIN	ENSCINP00000007453	ENSCINP00000016316	OTU domain-containing protein.	HECT domain-containing protein.	0.479
F6U8W0_CIOIN	H2XLP4_CIOIN	ENSCINP00000007453	ENSCINP00000030576	OTU domain-containing protein.	Uncharacterized protein.	0.479
F6U8W0_CIOIN	H2XPT0_CIOIN	ENSCINP00000007453	ENSCINP00000031664	OTU domain-containing protein.	Uncharacterized protein.	0.479
F6W7J0_CIOIN	F6YT81_CIOIN	ENSCINP00000002812	ENSCINP00000007327	Uncharacterized protein.	Uncharacterized protein.	0.926
F6WRI9_CIOIN	F6U8W0_CIOIN	ENSCINP00000016316	ENSCINP00000007453	HECT domain-containing protein.	OTU domain-containing protein.	0.479
F6WRI9_CIOIN	F7AHP3_CIOIN	ENSCINP00000016316	ENSCINP00000017607	HECT domain-containing protein.	Uncharacterized protein.	0.930
F6WRI9_CIOIN	H2XLP4_CIOIN	ENSCINP00000016316	ENSCINP00000030576	HECT domain-containing protein.	Uncharacterized protein.	0.925
F6WRI9_CIOIN	H2XPT0_CIOIN	ENSCINP00000016316	ENSCINP00000031664	HECT domain-containing protein.	Uncharacterized protein.	0.410
F6XHT6_CIOIN	F6TL19_CIOIN	ENSCINP00000019609	ENSCINP00000021491	UvrD-like helicase C-terminal domain-containing protein.	ENDO3c domain-containing protein.	0.402
F6XHT6_CIOIN	F7AWL5_CIOIN	ENSCINP00000019609	ENSCINP00000023021	UvrD-like helicase C-terminal domain-containing protein.	F-box domain-containing protein.	0.498
F6YT81_CIOIN	F6W7J0_CIOIN	ENSCINP00000007327	ENSCINP00000002812	Uncharacterized protein.	Uncharacterized protein.	0.926
F7AHP3_CIOIN	F6WRI9_CIOIN	ENSCINP00000017607	ENSCINP00000016316	Uncharacterized protein.	HECT domain-containing protein.	0.930
F7AHP3_CIOIN	H2XLP4_CIOIN	ENSCINP00000017607	ENSCINP00000030576	Uncharacterized protein.	Uncharacterized protein.	0.930
F7AHP3_CIOIN	H2XPT0_CIOIN	ENSCINP00000017607	ENSCINP00000031664	Uncharacterized protein.	Uncharacterized protein.	0.930
F7AWL5_CIOIN	F6TL19_CIOIN	ENSCINP00000023021	ENSCINP00000021491	F-box domain-containing protein.	ENDO3c domain-containing protein.	0.402
F7AWL5_CIOIN	F6XHT6_CIOIN	ENSCINP00000023021	ENSCINP00000019609	F-box domain-containing protein.	UvrD-like helicase C-terminal domain-containing protein.	0.498
H2XLP4_CIOIN	F6U8W0_CIOIN	ENSCINP00000030576	ENSCINP00000007453	Uncharacterized protein.	OTU domain-containing protein.	0.479
H2XLP4_CIOIN	F6WRI9_CIOIN	ENSCINP00000030576	ENSCINP00000016316	Uncharacterized protein.	HECT domain-containing protein.	0.925