(18 nodes) Regulation of double-strand break repair via nonhomologous end joining network (Ciona intestinalis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	H2Y3C6_CIOIN	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (540 aa)
	F6RSF3_CIOIN	SET domain-containing protein. (227 aa)
	F6W7J0_CIOIN	Uncharacterized protein. (224 aa)
	F6SQE1_CIOIN	Uncharacterized protein. (651 aa)
	F6SQA2_CIOIN	DTC domain-containing protein. (81 aa)
	F6SQ79_CIOIN	RING-type domain-containing protein. (190 aa)
	F6YT81_CIOIN	Uncharacterized protein. (157 aa)
	H2Y3M4_CIOIN	Uncharacterized protein. (185 aa)
	F6R982_CIOIN	WD_REPEATS_REGION domain-containing protein. (433 aa)
	F6Z761_CIOIN	Uncharacterized protein. (470 aa)
	LOC100185848	Deacetylase sirtuin-type domain-containing protein. (357 aa)
	F7A9P4_CIOIN	NUC194 domain-containing protein. (726 aa)
	F6VBZ6_CIOIN	Telo_bind domain-containing protein. (527 aa)
	F6X0L7_CIOIN	FHA_2 domain-containing protein. (571 aa)
	F6VQG0_CIOIN	Uncharacterized protein. (160 aa)
	H2XJP4_CIOIN	Uncharacterized protein. (368 aa)
	H2XNN7_CIOIN	Uncharacterized protein. (112 aa)
	H2XXZ3_CIOIN	Uncharacterized protein. (870 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6R982_CIOIN	F6VBZ6_CIOIN	ENSCINP00000009975	ENSCINP00000027127	WD_REPEATS_REGION domain-containing protein.	Telo_bind domain-containing protein.	0.549
F6VBZ6_CIOIN	F6R982_CIOIN	ENSCINP00000027127	ENSCINP00000009975	Telo_bind domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.549
F6W7J0_CIOIN	F6YT81_CIOIN	ENSCINP00000002812	ENSCINP00000007327	Uncharacterized protein.	Uncharacterized protein.	0.926
F6YT81_CIOIN	F6W7J0_CIOIN	ENSCINP00000007327	ENSCINP00000002812	Uncharacterized protein.	Uncharacterized protein.	0.926
F7A9P4_CIOIN	H2Y3C6_CIOIN	ENSCINP00000023638	ENSCINP00000036411	NUC194 domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.945
F7A9P4_CIOIN	H2Y3M4_CIOIN	ENSCINP00000023638	ENSCINP00000036509	NUC194 domain-containing protein.	Uncharacterized protein.	0.900
H2XJP4_CIOIN	H2XXZ3_CIOIN	ENSCINP00000029876	ENSCINP00000034527	Uncharacterized protein.	Uncharacterized protein.	0.591
H2XXZ3_CIOIN	H2XJP4_CIOIN	ENSCINP00000034527	ENSCINP00000029876	Uncharacterized protein.	Uncharacterized protein.	0.591
H2Y3C6_CIOIN	F7A9P4_CIOIN	ENSCINP00000036411	ENSCINP00000023638	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	NUC194 domain-containing protein.	0.945
H2Y3M4_CIOIN	F7A9P4_CIOIN	ENSCINP00000036509	ENSCINP00000023638	Uncharacterized protein.	NUC194 domain-containing protein.	0.900