STRINGSTRING
F6PMK8_CIOIN F6PMK8_CIOIN LOC100178517 LOC100178517 F6SLD6_CIOIN F6SLD6_CIOIN F6YVN3_CIOIN F6YVN3_CIOIN LOC100184050 LOC100184050 F7AWL5_CIOIN F7AWL5_CIOIN F6XHT6_CIOIN F6XHT6_CIOIN F6Z8I7_CIOIN F6Z8I7_CIOIN LOC100176033 LOC100176033 F6UJF1_CIOIN F6UJF1_CIOIN LOC100177697 LOC100177697
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6PMK8_CIOINUncharacterized protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (710 aa)
LOC100178517Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (142 aa)
F6SLD6_CIOINDeacetylase sirtuin-type domain-containing protein. (737 aa)
F6YVN3_CIOINUncharacterized protein. (165 aa)
LOC100184050Serine/threonine/tyrosine-interacting-like protein 1. (296 aa)
F7AWL5_CIOINF-box domain-containing protein. (431 aa)
F6XHT6_CIOINUvrD-like helicase C-terminal domain-containing protein. (212 aa)
F6Z8I7_CIOINUncharacterized protein. (428 aa)
LOC100176033KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (263 aa)
F6UJF1_CIOINUDENN FLCN/SMCR8-type domain-containing protein. (561 aa)
LOC100177697Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (236 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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