(71 nodes) Microtubule network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F7A0P0_CIOIN	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)
	F6SFZ9_CIOIN	RING-type domain-containing protein. (139 aa)
	F6QWV6_CIOIN	Uncharacterized protein. (227 aa)
	F6RNN9_CIOIN	Uncharacterized protein. (210 aa)
	F6YUP1_CIOIN	Uncharacterized protein. (166 aa)
	LOC100187291	Uncharacterized protein LOC100187291. (373 aa)
	F6ZTV7_CIOIN	CCDC66 domain-containing protein. (714 aa)
	F6T7Q1_CIOIN	HP domain-containing protein. (640 aa)
	F6W6K9_CIOIN	Uncharacterized protein. (1344 aa)
	pf-rib	Protofilament ribbon protein. (379 aa)
	F7B2Z0_CIOIN	Uncharacterized protein. (686 aa)
	LOC100176448	Protein C9orf135-like. (224 aa)
	F7ANB6_CIOIN	Uncharacterized protein. (652 aa)
	F7A4V3_CIOIN	Uncharacterized protein. (542 aa)
	LOC100180876	Uncharacterized protein C1orf158 homolog. (227 aa)
	F7B690_CIOIN	CAP-Gly domain-containing protein. (1092 aa)
	F6Y3N8_CIOIN	EF-hand domain-containing protein. (283 aa)
	F6V7V1_CIOIN	Uncharacterized protein. (513 aa)
	LOC100186389	Transmembrane protein 214-A. (674 aa)
	F6UBS1_CIOIN	Uncharacterized protein. (242 aa)
	F6Q476_CIOIN	HAUS6_N domain-containing protein. (615 aa)
	LOC100179482	Stabilizer of axonemal microtubules 2. (452 aa)
	F6TDK2_CIOIN	Uncharacterized protein. (567 aa)
	F6XBA5_CIOIN	Uncharacterized protein. (497 aa)
	F6U7S8_CIOIN	BTB domain-containing protein. (592 aa)
	LOC100178371	Stabilizer of axonemal microtubules 2. (429 aa)
	LOC100177416	Sperm-associated antigen 8-like. (201 aa)
	LOC100181072	Microtubule-associated protein RP/EB family member 1 isoform X4. (309 aa)
	F6UD02_CIOIN	Uncharacterized protein. (660 aa)
	F6PHQ6_CIOIN	Uncharacterized protein. (91 aa)
	F6RC10_CIOIN	Uncharacterized protein. (496 aa)
	F7BHD6_CIOIN	FHA domain-containing protein. (474 aa)
	LOC100175467	Cilia- and flagella-associated protein 20 isoform X2. (192 aa)
	LOC100183902	Centriole, cilia and spindle-associated protein. (246 aa)
	F6ZDX4_CIOIN	Uncharacterized protein. (460 aa)
	LOC100182355	Protein FAM166B-like. (287 aa)
	F6X8U3_CIOIN	Uncharacterized protein. (197 aa)
	F6T9V7_CIOIN	B30.2/SPRY domain-containing protein. (141 aa)
	F6RXH0_CIOIN	Uncharacterized protein. (611 aa)
	F6XCT9_CIOIN	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (256 aa)
	F6W300_CIOIN	Uncharacterized protein. (526 aa)
	F6VR85_CIOIN	Uncharacterized protein. (445 aa)
	ci-ndk/dm44	Radial spoke protein NDK/DM44; Belongs to the NDK family. (388 aa)
	F7AR88_CIOIN	Uncharacterized protein. (229 aa)
	F6SY22_CIOIN	Uncharacterized protein. (307 aa)
	F6ZA22_CIOIN	Uncharacterized protein. (252 aa)
	F6WHH4_CIOIN	BRCT domain-containing protein. (198 aa)
	LOC100176430	ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	F7BC57_CIOIN	BTB domain-containing protein. (659 aa)
	F6WE55_CIOIN	Uncharacterized protein. (851 aa)
	H2XK14_CIOIN	CAP-Gly domain-containing protein. (94 aa)
	LOC100180225	Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (411 aa)
	H2XMT6_CIOIN	Uncharacterized protein. (462 aa)
	H2XN32_CIOIN	Uncharacterized protein. (302 aa)
	H2XNK3_CIOIN	Uncharacterized protein. (1478 aa)
	H2XP87_CIOIN	Uncharacterized protein. (242 aa)
	LOC100177850	DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (326 aa)
	LOC100175406	Spindle and kinetochore-associated protein 1-like isoform X1. (249 aa)
	H2XRN4_CIOIN	TOG domain-containing protein. (1583 aa)
	H2XSV0_CIOIN	Uncharacterized protein. (63 aa)
	H2XT68_CIOIN	Enkurin domain-containing protein. (291 aa)
	H2XU42_CIOIN	Uncharacterized protein. (118 aa)
	LOC100186201	HAUS augmin-like complex subunit 8 isoform X1. (454 aa)
	LOC100182799	Uncharacterized protein. (144 aa)
	LOC100180090	Receptor expression-enhancing protein. (326 aa)
	H2XW96_CIOIN	Uncharacterized protein. (82 aa)
	H2XWI8_CIOIN	TPR_REGION domain-containing protein. (298 aa)
	H2XWV3_CIOIN	Rod_C domain-containing protein. (792 aa)
	LOC100177695	Uncharacterized protein. (236 aa)
	LOC100176209	Uncharacterized protein. (311 aa)
	H2Y0Y1_CIOIN	Uncharacterized protein. (227 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6Q476_CIOIN	F6X8U3_CIOIN	ENSCINP00000013010	ENSCINP00000022216	HAUS6_N domain-containing protein.	Uncharacterized protein.	0.978
F6Q476_CIOIN	F7B690_CIOIN	ENSCINP00000013010	ENSCINP00000010951	HAUS6_N domain-containing protein.	CAP-Gly domain-containing protein.	0.405
F6Q476_CIOIN	LOC100181072	ENSCINP00000013010	ENSCINP00000017488	HAUS6_N domain-containing protein.	Microtubule-associated protein RP/EB family member 1 isoform X4.	0.424
F6RC10_CIOIN	F6XCT9_CIOIN	ENSCINP00000018317	ENSCINP00000023720	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.708
F6RC10_CIOIN	F7A0P0_CIOIN	ENSCINP00000018317	ENSCINP00000000208	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.951
F6RC10_CIOIN	F7BHD6_CIOIN	ENSCINP00000018317	ENSCINP00000019200	Uncharacterized protein.	FHA domain-containing protein.	0.579
F6RC10_CIOIN	LOC100187291	ENSCINP00000018317	ENSCINP00000002592	Uncharacterized protein.	Uncharacterized protein LOC100187291.	0.814
F6RNN9_CIOIN	F7A0P0_CIOIN	ENSCINP00000001481	ENSCINP00000000208	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.655
F6SFZ9_CIOIN	F7A0P0_CIOIN	ENSCINP00000000466	ENSCINP00000000208	RING-type domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.655
F6SY22_CIOIN	F6TDK2_CIOIN	ENSCINP00000026324	ENSCINP00000013665	Uncharacterized protein.	Uncharacterized protein.	0.457
F6SY22_CIOIN	F6XBA5_CIOIN	ENSCINP00000026324	ENSCINP00000013874	Uncharacterized protein.	Uncharacterized protein.	0.527
F6SY22_CIOIN	F6Y3N8_CIOIN	ENSCINP00000026324	ENSCINP00000011460	Uncharacterized protein.	EF-hand domain-containing protein.	0.410
F6SY22_CIOIN	F6YUP1_CIOIN	ENSCINP00000026324	ENSCINP00000002164	Uncharacterized protein.	Uncharacterized protein.	0.518
F6SY22_CIOIN	F7AR88_CIOIN	ENSCINP00000026324	ENSCINP00000025727	Uncharacterized protein.	Uncharacterized protein.	0.410
F6SY22_CIOIN	H2XN32_CIOIN	ENSCINP00000026324	ENSCINP00000031065	Uncharacterized protein.	Uncharacterized protein.	0.417
F6SY22_CIOIN	LOC100175467	ENSCINP00000026324	ENSCINP00000019378	Uncharacterized protein.	Cilia- and flagella-associated protein 20 isoform X2.	0.457
F6SY22_CIOIN	LOC100176209	ENSCINP00000026324	ENSCINP00000034754	Uncharacterized protein.	Uncharacterized protein.	0.419
F6SY22_CIOIN	LOC100176448	ENSCINP00000026324	ENSCINP00000008113	Uncharacterized protein.	Protein C9orf135-like.	0.484
F6SY22_CIOIN	LOC100177416	ENSCINP00000026324	ENSCINP00000016212	Uncharacterized protein.	Sperm-associated antigen 8-like.	0.483
F6SY22_CIOIN	LOC100177695	ENSCINP00000026324	ENSCINP00000034397	Uncharacterized protein.	Uncharacterized protein.	0.410