(76 nodes) Dynein complex network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XQ18_CIOIN	Uncharacterized protein. (916 aa)
	F6TSE4_CIOIN	Uncharacterized protein. (200 aa)
	LOC100185043	Uncharacterized protein. (495 aa)
	F7BKE7_CIOIN	Uncharacterized protein. (719 aa)
	F7BKD0_CIOIN	MT domain-containing protein. (131 aa)
	LOC100184261	CS domain-containing protein. (241 aa)
	LOC100179890	Uncharacterized protein. (828 aa)
	F6TKP9_CIOIN	Uncharacterized protein. (1319 aa)
	AXP83.9	Axonemal 84 kDa protein; Belongs to the CASC1 family. (735 aa)
	F6ZKS0_CIOIN	Uncharacterized protein. (3431 aa)
	F6XKS1_CIOIN	Uncharacterized protein. (760 aa)
	F6V9J0_CIOIN	Uncharacterized protein. (3241 aa)
	LOC100184836	Uncharacterized protein. (4603 aa)
	F7BML6_CIOIN	WD_REPEATS_REGION domain-containing protein. (528 aa)
	LOC100179839	Sorting nexin-4-like. (441 aa)
	F7BQ38_CIOIN	Uncharacterized protein. (226 aa)
	F7AU91_CIOIN	Uncharacterized protein. (4471 aa)
	dnal1	Dynein light chain 1, axonemal; Part of the multisubunit axonemal ATPase complexes that generate the force for cilia motility and govern beat frequency (By similarity). Component of the outer arm dynein (ODA). May be involved in a mechanosensory feedback mechanism controlling ODA activity based on external conformational cues by tethering the outer arm dynein heavy chain (DNAH5) to the microtubule within the axoneme (By similarity). (190 aa)
	LOC100180857	Uncharacterized protein. (3522 aa)
	LOC100178848	Uncharacterized protein. (628 aa)
	LOC100185458	Uncharacterized protein LOC100185458. (315 aa)
	LOC100175422	Ig-like domain-containing protein. (270 aa)
	F6UZT3_CIOIN	Uncharacterized protein. (1114 aa)
	Ic1	Uncharacterized protein. (594 aa)
	F6VYZ5_CIOIN	WD_REPEATS_REGION domain-containing protein. (778 aa)
	dlc	Dynein light chain isoform X1. (168 aa)
	F7A1Q2_CIOIN	Dynein_C domain-containing protein. (206 aa)
	F7A1G4_CIOIN	AAA_6 domain-containing protein. (302 aa)
	F6ZZ40_CIOIN	Uncharacterized protein. (4467 aa)
	LOC778840	WD_REPEATS_REGION domain-containing protein. (661 aa)
	LOC100183423	Tctex1 domain-containing protein 2 isoform X1. (236 aa)
	F6PHB9_CIOIN	Uncharacterized protein. (4239 aa)
	LOC100187521	Uncharacterized protein. (348 aa)
	F6UI30_CIOIN	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (184 aa)
	F7BMY3_CIOIN	Uncharacterized protein. (566 aa)
	F6YXX9_CIOIN	Uncharacterized protein. (883 aa)
	LOC100181451	Tctex1 domain-containing protein 1-B-like. (186 aa)
	F7B0V6_CIOIN	AAA_9 domain-containing protein. (155 aa)
	F7B0V0_CIOIN	Dynein_heavy domain-containing protein. (211 aa)
	F6PXH6_CIOIN	AAA_8 domain-containing protein. (56 aa)
	F6ZS71_CIOIN	CS domain-containing protein. (236 aa)
	H2XJQ0_CIOIN	Dynein_C domain-containing protein. (158 aa)
	H2XKI5_CIOIN	Uncharacterized protein. (294 aa)
	LOC100175917	Uncharacterized protein. (241 aa)
	H2XM13_CIOIN	Uncharacterized protein. (435 aa)
	H2XMG3_CIOIN	Uncharacterized protein. (179 aa)
	H2XN95_CIOIN	AAA_9 domain-containing protein. (241 aa)
	H2XPC8_CIOIN	Uncharacterized protein. (4583 aa)
	H2XPT3_CIOIN	Uncharacterized protein. (704 aa)
	H2XPY4_CIOIN	Uncharacterized protein. (95 aa)
	Rbdlc	Dynein light chain roadblock. (96 aa)
	H2XQA7_CIOIN	Dynein_C domain-containing protein. (181 aa)
	H2XQK8_CIOIN	Uncharacterized protein. (126 aa)
	H2XRF6_CIOIN	Uncharacterized protein. (230 aa)
	H2XS35_CIOIN	Dynein_C domain-containing protein. (142 aa)
	H2XSB7_CIOIN	Dynein_heavy domain-containing protein. (98 aa)
	H2XSR1_CIOIN	Uncharacterized protein. (167 aa)
	H2XU58_CIOIN	AAA_9 domain-containing protein. (142 aa)
	H2XUV8_CIOIN	Uncharacterized protein. (678 aa)
	H2XVT5_CIOIN	Uncharacterized protein. (59 aa)
	H2XVW0_CIOIN	Dynein_AAA_lid domain-containing protein. (214 aa)
	H2XW66_CIOIN	Uncharacterized protein. (182 aa)
	H2XWA3_CIOIN	DHC_N2 domain-containing protein. (79 aa)
	H2XWV7_CIOIN	Uncharacterized protein. (202 aa)
	H2XZ78_CIOIN	Uncharacterized protein. (112 aa)
	H2XZA3_CIOIN	Uncharacterized protein. (126 aa)
	H2XZK1_CIOIN	DHC_N2 domain-containing protein. (216 aa)
	H2Y1E3_CIOIN	AAA_lid_1 domain-containing protein. (174 aa)
	H2Y1F8_CIOIN	Dynein_C domain-containing protein. (211 aa)
	H2Y214_CIOIN	Dynein_C domain-containing protein. (283 aa)
	H2Y224_CIOIN	FAM193_C domain-containing protein. (180 aa)
	H2Y254_CIOIN	Uncharacterized protein. (166 aa)
	H2Y2K7_CIOIN	Uncharacterized protein. (258 aa)
	H2Y3B9_CIOIN	AAA_6 domain-containing protein. (223 aa)
	H2Y3I1_CIOIN	Uncharacterized protein. (276 aa)
	H2Y3U6_CIOIN	Uncharacterized protein. (486 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6PHB9_CIOIN	F6UI30_CIOIN	ENSCINP00000018292	ENSCINP00000022842	Uncharacterized protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.404
F6PHB9_CIOIN	F6UZT3_CIOIN	ENSCINP00000018292	ENSCINP00000014285	Uncharacterized protein.	Uncharacterized protein.	0.542
F6PHB9_CIOIN	F6VYZ5_CIOIN	ENSCINP00000018292	ENSCINP00000015129	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.631
F6PHB9_CIOIN	F6XKS1_CIOIN	ENSCINP00000018292	ENSCINP00000007038	Uncharacterized protein.	Uncharacterized protein.	0.542
F6PHB9_CIOIN	F6YXX9_CIOIN	ENSCINP00000018292	ENSCINP00000024256	Uncharacterized protein.	Uncharacterized protein.	0.619
F6PHB9_CIOIN	F7A1Q2_CIOIN	ENSCINP00000018292	ENSCINP00000017079	Uncharacterized protein.	Dynein_C domain-containing protein.	0.810
F6PHB9_CIOIN	F7BML6_CIOIN	ENSCINP00000018292	ENSCINP00000008987	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.490
F6PHB9_CIOIN	H2XPC8_CIOIN	ENSCINP00000018292	ENSCINP00000031511	Uncharacterized protein.	Uncharacterized protein.	0.548
F6PHB9_CIOIN	H2XS35_CIOIN	ENSCINP00000018292	ENSCINP00000032469	Uncharacterized protein.	Dynein_C domain-containing protein.	0.939
F6PHB9_CIOIN	H2XSR1_CIOIN	ENSCINP00000018292	ENSCINP00000032695	Uncharacterized protein.	Uncharacterized protein.	0.459
F6PHB9_CIOIN	Ic1	ENSCINP00000018292	ENSCINP00000014437	Uncharacterized protein.	Uncharacterized protein.	0.644
F6PHB9_CIOIN	LOC100184836	ENSCINP00000018292	ENSCINP00000008812	Uncharacterized protein.	Uncharacterized protein.	0.548
F6PHB9_CIOIN	LOC100185458	ENSCINP00000018292	ENSCINP00000012560	Uncharacterized protein.	Uncharacterized protein LOC100185458.	0.442
F6PHB9_CIOIN	LOC778840	ENSCINP00000018292	ENSCINP00000017986	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.669
F6PHB9_CIOIN	Rbdlc	ENSCINP00000018292	ENSCINP00000031790	Uncharacterized protein.	Dynein light chain roadblock.	0.401
F6TKP9_CIOIN	F6TSE4_CIOIN	ENSCINP00000002304	ENSCINP00000000108	Uncharacterized protein.	Uncharacterized protein.	0.899
F6TKP9_CIOIN	F6XKS1_CIOIN	ENSCINP00000002304	ENSCINP00000007038	Uncharacterized protein.	Uncharacterized protein.	0.941
F6TKP9_CIOIN	F7A1Q2_CIOIN	ENSCINP00000002304	ENSCINP00000017079	Uncharacterized protein.	Dynein_C domain-containing protein.	0.844
F6TKP9_CIOIN	F7BKD0_CIOIN	ENSCINP00000002304	ENSCINP00000000788	Uncharacterized protein.	MT domain-containing protein.	0.898
F6TKP9_CIOIN	H2XKI5_CIOIN	ENSCINP00000002304	ENSCINP00000030167	Uncharacterized protein.	Uncharacterized protein.	0.915