(48 nodes) Axon network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F6U1B1_CIOIN	Amino acid transporter. (500 aa)
	F6U0I8_CIOIN	Amidohydro-rel domain-containing protein. (544 aa)
	LOC494386	Ion_trans domain-containing protein. (371 aa)
	F6WSD2_CIOIN	BSD domain-containing protein. (400 aa)
	F6W6K0_CIOIN	Uncharacterized protein. (534 aa)
	LOC100176945	Protein unc-13 homolog B-like. (1518 aa)
	F6RA92_CIOIN	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (432 aa)
	Vachtp	MFS domain-containing protein. (657 aa)
	F6YD53_CIOIN	Aldo_ket_red domain-containing protein. (332 aa)
	F6T2R5_CIOIN	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family. (914 aa)
	F6T2N7_CIOIN	Adaptin_N domain-containing protein. (243 aa)
	F6QJQ8_CIOIN	Uncharacterized protein. (586 aa)
	F6TLB6_CIOIN	Uncharacterized protein. (891 aa)
	Fgf11/12/13/14	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (182 aa)
	F6QMU4_CIOIN	Uncharacterized protein. (390 aa)
	F6TXZ0_CIOIN	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family. (1047 aa)
	F6Z2G5_CIOIN	MFS domain-containing protein. (488 aa)
	F6WQG5_CIOIN	Uncharacterized protein. (83 aa)
	LOC100185251-2	Zinc finger protein. (339 aa)
	F6WWH2_CIOIN	PH domain-containing protein. (715 aa)
	F6WVW2_CIOIN	Uncharacterized protein. (1152 aa)
	LOC100187236	Uncharacterized protein. (468 aa)
	F6Q9P9_CIOIN	Uncharacterized protein. (675 aa)
	F6R2J6_CIOIN	Uncharacterized protein. (343 aa)
	F6QEJ1_CIOIN	DUF3498 domain-containing protein. (633 aa)
	F6QEI5_CIOIN	PH domain-containing protein. (304 aa)
	F6ZM72_CIOIN	Uncharacterized protein. (197 aa)
	F6YQ38_CIOIN	Uncharacterized protein. (170 aa)
	Kcnq4/5	Uncharacterized protein. (702 aa)
	F7AQW7_CIOIN	Uncharacterized protein. (158 aa)
	F7ABJ7_CIOIN	Ion_trans domain-containing protein. (203 aa)
	F6RMZ6_CIOIN	Uncharacterized protein. (171 aa)
	F6W3W9_CIOIN	Uncharacterized protein. (758 aa)
	F6RU88_CIOIN	Uncharacterized protein. (445 aa)
	F6T2G1_CIOIN	Uncharacterized protein. (298 aa)
	H2XJL8_CIOIN	Uncharacterized protein. (292 aa)
	H2XLI1_CIOIN	Uncharacterized protein. (334 aa)
	otx2	Transcription factor protein. (425 aa)
	H2XP78_CIOIN	RRM domain-containing protein. (85 aa)
	H2XQT4_CIOIN	Uncharacterized protein. (321 aa)
	H2XRH2_CIOIN	Uncharacterized protein. (790 aa)
	H2XRU0_CIOIN	Sec8_exocyst domain-containing protein. (843 aa)
	H2XUZ6_CIOIN	Uncharacterized protein. (139 aa)
	H2XVW8_CIOIN	Uncharacterized protein. (272 aa)
	H2XXD5_CIOIN	Uncharacterized protein. (188 aa)
	H2XZX6_CIOIN	Phorbol-ester/DAG-type domain-containing protein. (399 aa)
	LOC100184009	Sjoegren syndrome nuclear autoantigen 1 homolog. (130 aa)
	H2Y3R8_CIOIN	Uncharacterized protein. (229 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F6QJQ8_CIOIN	H2XJL8_CIOIN	ENSCINP00000006400	ENSCINP00000029850	Uncharacterized protein.	Uncharacterized protein.	0.468
F6T2G1_CIOIN	F6TLB6_CIOIN	ENSCINP00000029547	ENSCINP00000007196	Uncharacterized protein.	Uncharacterized protein.	0.950
F6T2G1_CIOIN	F6W3W9_CIOIN	ENSCINP00000029547	ENSCINP00000028344	Uncharacterized protein.	Uncharacterized protein.	0.946
F6T2N7_CIOIN	F6T2R5_CIOIN	ENSCINP00000005597	ENSCINP00000005593	Adaptin_N domain-containing protein.	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	0.973
F6T2N7_CIOIN	Vachtp	ENSCINP00000005597	ENSCINP00000005235	Adaptin_N domain-containing protein.	MFS domain-containing protein.	0.640
F6T2R5_CIOIN	F6T2N7_CIOIN	ENSCINP00000005593	ENSCINP00000005597	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	Adaptin_N domain-containing protein.	0.973
F6T2R5_CIOIN	Vachtp	ENSCINP00000005593	ENSCINP00000005235	AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.	MFS domain-containing protein.	0.640
F6TLB6_CIOIN	F6T2G1_CIOIN	ENSCINP00000007196	ENSCINP00000029547	Uncharacterized protein.	Uncharacterized protein.	0.950
F6TLB6_CIOIN	F6W3W9_CIOIN	ENSCINP00000007196	ENSCINP00000028344	Uncharacterized protein.	Uncharacterized protein.	0.949
F6U0I8_CIOIN	H2XJL8_CIOIN	ENSCINP00000001663	ENSCINP00000029850	Amidohydro-rel domain-containing protein.	Uncharacterized protein.	0.468
F6W3W9_CIOIN	F6T2G1_CIOIN	ENSCINP00000028344	ENSCINP00000029547	Uncharacterized protein.	Uncharacterized protein.	0.946
F6W3W9_CIOIN	F6TLB6_CIOIN	ENSCINP00000028344	ENSCINP00000007196	Uncharacterized protein.	Uncharacterized protein.	0.949
F6WVW2_CIOIN	H2Y3R8_CIOIN	ENSCINP00000014525	ENSCINP00000036553	Uncharacterized protein.	Uncharacterized protein.	0.572
F6WWH2_CIOIN	H2XRU0_CIOIN	ENSCINP00000014502	ENSCINP00000032374	PH domain-containing protein.	Sec8_exocyst domain-containing protein.	0.999
F6YD53_CIOIN	Kcnq4/5	ENSCINP00000005438	ENSCINP00000021750	Aldo_ket_red domain-containing protein.	Uncharacterized protein.	0.616
F6Z2G5_CIOIN	LOC100176945	ENSCINP00000010499	ENSCINP00000004445	MFS domain-containing protein.	Protein unc-13 homolog B-like.	0.627
Fgf11/12/13/14	otx2	ENSCINP00000008466	ENSCINP00000031453	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	Transcription factor protein.	0.502
H2XJL8_CIOIN	F6QJQ8_CIOIN	ENSCINP00000029850	ENSCINP00000006400	Uncharacterized protein.	Uncharacterized protein.	0.468
H2XJL8_CIOIN	F6U0I8_CIOIN	ENSCINP00000029850	ENSCINP00000001663	Uncharacterized protein.	Amidohydro-rel domain-containing protein.	0.468
H2XRU0_CIOIN	F6WWH2_CIOIN	ENSCINP00000032374	ENSCINP00000014502	Sec8_exocyst domain-containing protein.	PH domain-containing protein.	0.999