(7 nodes) Microtubule plus-end network (Ciona intestinalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	H2XNK3_CIOIN	Uncharacterized protein. (1478 aa)
	H2XMT6_CIOIN	Uncharacterized protein. (462 aa)
	LOC100181072	Microtubule-associated protein RP/EB family member 1 isoform X4. (309 aa)
	H2XK14_CIOIN	CAP-Gly domain-containing protein. (94 aa)
	F6RXH0_CIOIN	Uncharacterized protein. (611 aa)
	F7B2Z0_CIOIN	Uncharacterized protein. (686 aa)
	F7B690_CIOIN	CAP-Gly domain-containing protein. (1092 aa)

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F7B690_CIOIN	H2XNK3_CIOIN	ENSCINP00000010951	ENSCINP00000031236	CAP-Gly domain-containing protein.	Uncharacterized protein.	0.851
F7B690_CIOIN	LOC100181072	ENSCINP00000010951	ENSCINP00000017488	CAP-Gly domain-containing protein.	Microtubule-associated protein RP/EB family member 1 isoform X4.	0.686
H2XK14_CIOIN	LOC100181072	ENSCINP00000029996	ENSCINP00000017488	CAP-Gly domain-containing protein.	Microtubule-associated protein RP/EB family member 1 isoform X4.	0.600
H2XMT6_CIOIN	LOC100181072	ENSCINP00000030969	ENSCINP00000017488	Uncharacterized protein.	Microtubule-associated protein RP/EB family member 1 isoform X4.	0.600
H2XNK3_CIOIN	F7B690_CIOIN	ENSCINP00000031236	ENSCINP00000010951	Uncharacterized protein.	CAP-Gly domain-containing protein.	0.851
H2XNK3_CIOIN	LOC100181072	ENSCINP00000031236	ENSCINP00000017488	Uncharacterized protein.	Microtubule-associated protein RP/EB family member 1 isoform X4.	0.943
LOC100181072	F7B690_CIOIN	ENSCINP00000017488	ENSCINP00000010951	Microtubule-associated protein RP/EB family member 1 isoform X4.	CAP-Gly domain-containing protein.	0.686
LOC100181072	H2XK14_CIOIN	ENSCINP00000017488	ENSCINP00000029996	Microtubule-associated protein RP/EB family member 1 isoform X4.	CAP-Gly domain-containing protein.	0.600
LOC100181072	H2XMT6_CIOIN	ENSCINP00000017488	ENSCINP00000030969	Microtubule-associated protein RP/EB family member 1 isoform X4.	Uncharacterized protein.	0.600
LOC100181072	H2XNK3_CIOIN	ENSCINP00000017488	ENSCINP00000031236	Microtubule-associated protein RP/EB family member 1 isoform X4.	Uncharacterized protein.	0.943