STRINGSTRING
F6YCG7_CIOIN F6YCG7_CIOIN F6W6K0_CIOIN F6W6K0_CIOIN F6RA92_CIOIN F6RA92_CIOIN LOC100186372 LOC100186372 LOC100185251-2 LOC100185251-2 hb3 hb3 F6SBG0_CIOIN F6SBG0_CIOIN th th LOC100187236 LOC100187236 LOC100177154 LOC100177154 F7ACB9_CIOIN F7ACB9_CIOIN F7BER6_CIOIN F7BER6_CIOIN F6RU88_CIOIN F6RU88_CIOIN LOC100180225 LOC100180225 H2XNI5_CIOIN H2XNI5_CIOIN H2XSL3_CIOIN H2XSL3_CIOIN H2XUP8_CIOIN H2XUP8_CIOIN H2XVW8_CIOIN H2XVW8_CIOIN H2XX80_CIOIN H2XX80_CIOIN H2XZ12_CIOIN H2XZ12_CIOIN
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
F6YCG7_CIOINAdenylate cyclase type 6; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1086 aa)
F6W6K0_CIOINUncharacterized protein. (534 aa)
F6RA92_CIOINPresenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (432 aa)
LOC100186372Cysteine-rich PDZ-binding protein-like. (101 aa)
LOC100185251-2Zinc finger protein. (339 aa)
hb3GLOBIN domain-containing protein; Belongs to the globin family. (153 aa)
F6SBG0_CIOINUncharacterized protein. (514 aa)
thBH4_AAA_HYDROXYL_2 domain-containing protein. (429 aa)
LOC100187236Uncharacterized protein. (468 aa)
LOC100177154Aa_trans domain-containing protein. (467 aa)
F7ACB9_CIOINCaMBD domain-containing protein. (582 aa)
F7BER6_CIOINRIC3 domain-containing protein. (256 aa)
F6RU88_CIOINUncharacterized protein. (445 aa)
LOC100180225Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. (411 aa)
H2XNI5_CIOINIg-like domain-containing protein. (202 aa)
H2XSL3_CIOINE3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (1827 aa)
H2XUP8_CIOINIg-like domain-containing protein. (132 aa)
H2XVW8_CIOINUncharacterized protein. (272 aa)
H2XX80_CIOINBHLH domain-containing protein. (293 aa)
H2XZ12_CIOINUncharacterized protein. (256 aa)
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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